Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6921 | 20986;20987;20988 | chr2:178725443;178725442;178725441 | chr2:179590170;179590169;179590168 |
N2AB | 6604 | 20035;20036;20037 | chr2:178725443;178725442;178725441 | chr2:179590170;179590169;179590168 |
N2A | 5677 | 17254;17255;17256 | chr2:178725443;178725442;178725441 | chr2:179590170;179590169;179590168 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | None | N | 0.245 | 0.144 | 0.252681307341 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2012 | likely_benign | 0.1923 | benign | -1.046 | Destabilizing | 0.007 | N | 0.551 | neutral | None | None | None | None | N |
N/C | 0.2163 | likely_benign | 0.225 | benign | -0.259 | Destabilizing | 0.676 | D | 0.762 | deleterious | None | None | None | None | N |
N/D | 0.1083 | likely_benign | 0.1039 | benign | -0.853 | Destabilizing | None | N | 0.283 | neutral | N | 0.420479747 | None | None | N |
N/E | 0.5156 | ambiguous | 0.5066 | ambiguous | -0.64 | Destabilizing | 0.016 | N | 0.49 | neutral | None | None | None | None | N |
N/F | 0.4625 | ambiguous | 0.4729 | ambiguous | -0.67 | Destabilizing | 0.214 | N | 0.757 | deleterious | None | None | None | None | N |
N/G | 0.2964 | likely_benign | 0.2775 | benign | -1.455 | Destabilizing | 0.016 | N | 0.463 | neutral | None | None | None | None | N |
N/H | 0.0914 | likely_benign | 0.099 | benign | -0.811 | Destabilizing | None | N | 0.369 | neutral | N | 0.470837649 | None | None | N |
N/I | 0.2372 | likely_benign | 0.2418 | benign | 0.043 | Stabilizing | 0.055 | N | 0.725 | prob.delet. | N | 0.506167349 | None | None | N |
N/K | 0.5988 | likely_pathogenic | 0.6268 | pathogenic | -0.073 | Destabilizing | 0.012 | N | 0.497 | neutral | N | 0.505406881 | None | None | N |
N/L | 0.239 | likely_benign | 0.2393 | benign | 0.043 | Stabilizing | 0.031 | N | 0.636 | neutral | None | None | None | None | N |
N/M | 0.3057 | likely_benign | 0.2878 | benign | 0.269 | Stabilizing | 0.628 | D | 0.751 | deleterious | None | None | None | None | N |
N/P | 0.8294 | likely_pathogenic | 0.8161 | pathogenic | -0.292 | Destabilizing | 0.136 | N | 0.689 | prob.neutral | None | None | None | None | N |
N/Q | 0.4232 | ambiguous | 0.417 | ambiguous | -0.711 | Destabilizing | 0.072 | N | 0.519 | neutral | None | None | None | None | N |
N/R | 0.5973 | likely_pathogenic | 0.6331 | pathogenic | -0.201 | Destabilizing | 0.072 | N | 0.525 | neutral | None | None | None | None | N |
N/S | 0.0702 | likely_benign | 0.066 | benign | -1.152 | Destabilizing | None | N | 0.245 | neutral | N | 0.511164119 | None | None | N |
N/T | 0.1377 | likely_benign | 0.1315 | benign | -0.711 | Destabilizing | None | N | 0.246 | neutral | N | 0.498677612 | None | None | N |
N/V | 0.225 | likely_benign | 0.224 | benign | -0.292 | Destabilizing | 0.072 | N | 0.651 | neutral | None | None | None | None | N |
N/W | 0.7537 | likely_pathogenic | 0.7659 | pathogenic | -0.429 | Destabilizing | 0.864 | D | 0.754 | deleterious | None | None | None | None | N |
N/Y | 0.1543 | likely_benign | 0.1761 | benign | -0.155 | Destabilizing | 0.093 | N | 0.746 | deleterious | N | 0.494557554 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.