Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6924 | 20995;20996;20997 | chr2:178725434;178725433;178725432 | chr2:179590161;179590160;179590159 |
N2AB | 6607 | 20044;20045;20046 | chr2:178725434;178725433;178725432 | chr2:179590161;179590160;179590159 |
N2A | 5680 | 17263;17264;17265 | chr2:178725434;178725433;178725432 | chr2:179590161;179590160;179590159 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs369993514 | None | 0.999 | D | 0.697 | 0.33 | 0.17258766438 | gnomAD-4.0.0 | 6.8523E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00335E-07 | 0 | 0 |
K/T | None | None | 0.999 | N | 0.745 | 0.49 | 0.52463718601 | gnomAD-4.0.0 | 5.48061E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.20134E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6276 | likely_pathogenic | 0.6618 | pathogenic | -0.683 | Destabilizing | 0.998 | D | 0.654 | neutral | None | None | None | None | N |
K/C | 0.8574 | likely_pathogenic | 0.8592 | pathogenic | -0.588 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/D | 0.7601 | likely_pathogenic | 0.7751 | pathogenic | -0.432 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
K/E | 0.3391 | likely_benign | 0.3917 | ambiguous | -0.288 | Destabilizing | 0.996 | D | 0.611 | neutral | D | 0.522765193 | None | None | N |
K/F | 0.8615 | likely_pathogenic | 0.8697 | pathogenic | -0.154 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | None | None | None | None | N |
K/G | 0.7351 | likely_pathogenic | 0.7395 | pathogenic | -1.101 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/H | 0.4189 | ambiguous | 0.4208 | ambiguous | -1.465 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
K/I | 0.4522 | ambiguous | 0.4937 | ambiguous | 0.427 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
K/L | 0.5372 | ambiguous | 0.5703 | pathogenic | 0.427 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/M | 0.3582 | ambiguous | 0.4042 | ambiguous | 0.334 | Stabilizing | 1.0 | D | 0.738 | prob.delet. | N | 0.498978554 | None | None | N |
K/N | 0.5305 | ambiguous | 0.5457 | ambiguous | -0.729 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | D | 0.537446644 | None | None | N |
K/P | 0.8651 | likely_pathogenic | 0.8689 | pathogenic | 0.087 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
K/Q | 0.2105 | likely_benign | 0.228 | benign | -0.711 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | N | 0.488708204 | None | None | N |
K/R | 0.0925 | likely_benign | 0.0916 | benign | -0.893 | Destabilizing | 0.64 | D | 0.336 | neutral | N | 0.495792022 | None | None | N |
K/S | 0.6316 | likely_pathogenic | 0.6496 | pathogenic | -1.338 | Destabilizing | 0.998 | D | 0.64 | neutral | None | None | None | None | N |
K/T | 0.2999 | likely_benign | 0.337 | benign | -0.974 | Destabilizing | 0.999 | D | 0.745 | deleterious | N | 0.519591602 | None | None | N |
K/V | 0.4754 | ambiguous | 0.5097 | ambiguous | 0.087 | Stabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
K/W | 0.8331 | likely_pathogenic | 0.8343 | pathogenic | -0.065 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
K/Y | 0.7018 | likely_pathogenic | 0.7116 | pathogenic | 0.203 | Stabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.