Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6927 | 21004;21005;21006 | chr2:178725425;178725424;178725423 | chr2:179590152;179590151;179590150 |
N2AB | 6610 | 20053;20054;20055 | chr2:178725425;178725424;178725423 | chr2:179590152;179590151;179590150 |
N2A | 5683 | 17272;17273;17274 | chr2:178725425;178725424;178725423 | chr2:179590152;179590151;179590150 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | rs767021612 | -1.112 | 1.0 | D | 0.907 | 0.795 | 0.865491910662 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.97E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.9156 | likely_pathogenic | 0.9193 | pathogenic | -1.248 | Destabilizing | 0.998 | D | 0.726 | prob.delet. | None | None | None | None | N |
C/D | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -1.638 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
C/E | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -1.378 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
C/F | 0.7965 | likely_pathogenic | 0.7877 | pathogenic | -0.648 | Destabilizing | 1.0 | D | 0.89 | deleterious | D | 0.542773344 | None | None | N |
C/G | 0.8496 | likely_pathogenic | 0.8579 | pathogenic | -1.591 | Destabilizing | 1.0 | D | 0.877 | deleterious | D | 0.544294281 | None | None | N |
C/H | 0.9976 | likely_pathogenic | 0.9981 | pathogenic | -1.774 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
C/I | 0.8084 | likely_pathogenic | 0.8301 | pathogenic | -0.306 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
C/K | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -0.868 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
C/L | 0.6937 | likely_pathogenic | 0.6937 | pathogenic | -0.306 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
C/M | 0.9392 | likely_pathogenic | 0.9448 | pathogenic | -0.16 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
C/N | 0.9973 | likely_pathogenic | 0.9979 | pathogenic | -1.62 | Destabilizing | 1.0 | D | 0.903 | deleterious | None | None | None | None | N |
C/P | 0.9988 | likely_pathogenic | 0.999 | pathogenic | -0.601 | Destabilizing | 1.0 | D | 0.902 | deleterious | None | None | None | None | N |
C/Q | 0.9983 | likely_pathogenic | 0.9987 | pathogenic | -1.067 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
C/R | 0.9954 | likely_pathogenic | 0.9964 | pathogenic | -1.43 | Destabilizing | 1.0 | D | 0.907 | deleterious | D | 0.544294281 | None | None | N |
C/S | 0.9628 | likely_pathogenic | 0.9678 | pathogenic | -1.822 | Destabilizing | 1.0 | D | 0.808 | deleterious | D | 0.544294281 | None | None | N |
C/T | 0.9704 | likely_pathogenic | 0.9741 | pathogenic | -1.394 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
C/V | 0.7326 | likely_pathogenic | 0.7422 | pathogenic | -0.601 | Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
C/W | 0.9879 | likely_pathogenic | 0.9903 | pathogenic | -1.154 | Destabilizing | 1.0 | D | 0.877 | deleterious | D | 0.544294281 | None | None | N |
C/Y | 0.9657 | likely_pathogenic | 0.968 | pathogenic | -0.882 | Destabilizing | 1.0 | D | 0.904 | deleterious | D | 0.544294281 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.