Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6930 | 21013;21014;21015 | chr2:178725416;178725415;178725414 | chr2:179590143;179590142;179590141 |
N2AB | 6613 | 20062;20063;20064 | chr2:178725416;178725415;178725414 | chr2:179590143;179590142;179590141 |
N2A | 5686 | 17281;17282;17283 | chr2:178725416;178725415;178725414 | chr2:179590143;179590142;179590141 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.042 | N | 0.274 | 0.148 | 0.264547087235 | gnomAD-4.0.0 | 1.60563E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88391E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5342 | ambiguous | 0.5024 | ambiguous | -0.837 | Destabilizing | 0.055 | N | 0.429 | neutral | None | None | None | None | I |
K/C | 0.7439 | likely_pathogenic | 0.7211 | pathogenic | -0.875 | Destabilizing | 0.958 | D | 0.525 | neutral | None | None | None | None | I |
K/D | 0.8431 | likely_pathogenic | 0.8249 | pathogenic | -0.585 | Destabilizing | 0.22 | N | 0.411 | neutral | None | None | None | None | I |
K/E | 0.2988 | likely_benign | 0.2589 | benign | -0.423 | Destabilizing | 0.042 | N | 0.274 | neutral | N | 0.494327798 | None | None | I |
K/F | 0.8598 | likely_pathogenic | 0.832 | pathogenic | -0.362 | Destabilizing | 0.667 | D | 0.551 | neutral | None | None | None | None | I |
K/G | 0.6097 | likely_pathogenic | 0.5754 | pathogenic | -1.259 | Destabilizing | 0.124 | N | 0.474 | neutral | None | None | None | None | I |
K/H | 0.3589 | ambiguous | 0.3298 | benign | -1.61 | Destabilizing | 0.667 | D | 0.473 | neutral | None | None | None | None | I |
K/I | 0.5137 | ambiguous | 0.484 | ambiguous | 0.288 | Stabilizing | 0.004 | N | 0.457 | neutral | None | None | None | None | I |
K/L | 0.5571 | ambiguous | 0.5286 | ambiguous | 0.288 | Stabilizing | 0.055 | N | 0.483 | neutral | None | None | None | None | I |
K/M | 0.3484 | ambiguous | 0.3279 | benign | 0.184 | Stabilizing | 0.602 | D | 0.481 | neutral | N | 0.510232727 | None | None | I |
K/N | 0.6468 | likely_pathogenic | 0.6021 | pathogenic | -0.889 | Destabilizing | 0.175 | N | 0.287 | neutral | N | 0.491114514 | None | None | I |
K/P | 0.9767 | likely_pathogenic | 0.9765 | pathogenic | -0.058 | Destabilizing | 0.667 | D | 0.471 | neutral | None | None | None | None | I |
K/Q | 0.1364 | likely_benign | 0.1233 | benign | -0.875 | Destabilizing | 0.175 | N | 0.411 | neutral | N | 0.490354046 | None | None | I |
K/R | 0.0754 | likely_benign | 0.0721 | benign | -0.881 | Destabilizing | None | N | 0.113 | neutral | D | 0.534406338 | None | None | I |
K/S | 0.5058 | ambiguous | 0.4619 | ambiguous | -1.545 | Destabilizing | 0.002 | N | 0.123 | neutral | None | None | None | None | I |
K/T | 0.2359 | likely_benign | 0.2143 | benign | -1.155 | Destabilizing | 0.001 | N | 0.235 | neutral | N | 0.494461084 | None | None | I |
K/V | 0.4982 | ambiguous | 0.4587 | ambiguous | -0.058 | Destabilizing | 0.055 | N | 0.466 | neutral | None | None | None | None | I |
K/W | 0.7566 | likely_pathogenic | 0.7379 | pathogenic | -0.262 | Destabilizing | 0.958 | D | 0.576 | neutral | None | None | None | None | I |
K/Y | 0.7323 | likely_pathogenic | 0.6916 | pathogenic | 0.047 | Stabilizing | 0.667 | D | 0.524 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.