Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6934 | 21025;21026;21027 | chr2:178725404;178725403;178725402 | chr2:179590131;179590130;179590129 |
N2AB | 6617 | 20074;20075;20076 | chr2:178725404;178725403;178725402 | chr2:179590131;179590130;179590129 |
N2A | 5690 | 17293;17294;17295 | chr2:178725404;178725403;178725402 | chr2:179590131;179590130;179590129 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs2079167703 | None | 1.0 | D | 0.881 | 0.686 | 0.875557798454 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/R | rs2079167703 | None | 1.0 | D | 0.881 | 0.686 | 0.875557798454 | gnomAD-4.0.0 | 5.20927E-06 | None | None | None | None | I | None | 1.69635E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 7.30048E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.6209 | likely_pathogenic | 0.6731 | pathogenic | -0.458 | Destabilizing | 1.0 | D | 0.747 | deleterious | D | 0.596657369 | None | None | I |
G/C | 0.8122 | likely_pathogenic | 0.8597 | pathogenic | -0.854 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | I |
G/D | 0.8514 | likely_pathogenic | 0.8879 | pathogenic | -1.144 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
G/E | 0.8671 | likely_pathogenic | 0.9019 | pathogenic | -1.314 | Destabilizing | 1.0 | D | 0.848 | deleterious | D | 0.548476515 | None | None | I |
G/F | 0.9469 | likely_pathogenic | 0.9584 | pathogenic | -1.196 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
G/H | 0.9412 | likely_pathogenic | 0.9592 | pathogenic | -0.775 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
G/I | 0.9089 | likely_pathogenic | 0.9365 | pathogenic | -0.577 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
G/K | 0.9477 | likely_pathogenic | 0.9623 | pathogenic | -1.122 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | I |
G/L | 0.9411 | likely_pathogenic | 0.9578 | pathogenic | -0.577 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
G/M | 0.9471 | likely_pathogenic | 0.9623 | pathogenic | -0.475 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
G/N | 0.871 | likely_pathogenic | 0.904 | pathogenic | -0.678 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
G/P | 0.9949 | likely_pathogenic | 0.9967 | pathogenic | -0.504 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | I |
G/Q | 0.8863 | likely_pathogenic | 0.9231 | pathogenic | -1.03 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
G/R | 0.8694 | likely_pathogenic | 0.907 | pathogenic | -0.564 | Destabilizing | 1.0 | D | 0.881 | deleterious | D | 0.622397285 | None | None | I |
G/S | 0.4305 | ambiguous | 0.5192 | ambiguous | -0.74 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | I |
G/T | 0.7875 | likely_pathogenic | 0.8523 | pathogenic | -0.861 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | I |
G/V | 0.8546 | likely_pathogenic | 0.8972 | pathogenic | -0.504 | Destabilizing | 1.0 | D | 0.848 | deleterious | D | 0.623002697 | None | None | I |
G/W | 0.9151 | likely_pathogenic | 0.9364 | pathogenic | -1.348 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | I |
G/Y | 0.9201 | likely_pathogenic | 0.9339 | pathogenic | -1.029 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.