Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6935 | 21028;21029;21030 | chr2:178725401;178725400;178725399 | chr2:179590128;179590127;179590126 |
N2AB | 6618 | 20077;20078;20079 | chr2:178725401;178725400;178725399 | chr2:179590128;179590127;179590126 |
N2A | 5691 | 17296;17297;17298 | chr2:178725401;178725400;178725399 | chr2:179590128;179590127;179590126 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/I | rs770899268 | -0.145 | 0.001 | N | 0.191 | 0.132 | 0.241664281697 | gnomAD-2.1.1 | 1.14E-05 | None | None | None | None | I | None | 1.26914E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
M/I | rs770899268 | -0.145 | 0.001 | N | 0.191 | 0.132 | 0.241664281697 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | I | None | 9.65E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
M/I | rs770899268 | -0.145 | 0.001 | N | 0.191 | 0.132 | 0.241664281697 | gnomAD-4.0.0 | 6.54127E-06 | None | None | None | None | I | None | 8.48119E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
M/A | 0.273 | likely_benign | 0.2165 | benign | -1.22 | Destabilizing | None | N | 0.164 | neutral | None | None | None | None | I |
M/C | 0.7105 | likely_pathogenic | 0.6316 | pathogenic | -1.051 | Destabilizing | 0.245 | N | 0.439 | neutral | None | None | None | None | I |
M/D | 0.7059 | likely_pathogenic | 0.627 | pathogenic | -0.33 | Destabilizing | 0.018 | N | 0.499 | neutral | None | None | None | None | I |
M/E | 0.3441 | ambiguous | 0.2938 | benign | -0.342 | Destabilizing | 0.004 | N | 0.385 | neutral | None | None | None | None | I |
M/F | 0.2495 | likely_benign | 0.2042 | benign | -0.431 | Destabilizing | 0.018 | N | 0.387 | neutral | None | None | None | None | I |
M/G | 0.4592 | ambiguous | 0.3862 | ambiguous | -1.474 | Destabilizing | 0.004 | N | 0.403 | neutral | None | None | None | None | I |
M/H | 0.4295 | ambiguous | 0.3519 | ambiguous | -0.5 | Destabilizing | 0.245 | N | 0.496 | neutral | None | None | None | None | I |
M/I | 0.1989 | likely_benign | 0.1649 | benign | -0.603 | Destabilizing | 0.001 | N | 0.191 | neutral | N | 0.494962516 | None | None | I |
M/K | 0.1689 | likely_benign | 0.1398 | benign | -0.25 | Destabilizing | 0.003 | N | 0.321 | neutral | N | 0.45022473 | None | None | I |
M/L | 0.1248 | likely_benign | 0.1097 | benign | -0.603 | Destabilizing | 0.001 | N | 0.155 | neutral | D | 0.531787321 | None | None | I |
M/N | 0.3413 | ambiguous | 0.2625 | benign | -0.112 | Destabilizing | 0.018 | N | 0.479 | neutral | None | None | None | None | I |
M/P | 0.7867 | likely_pathogenic | 0.7279 | pathogenic | -0.78 | Destabilizing | 0.037 | N | 0.519 | neutral | None | None | None | None | I |
M/Q | 0.1897 | likely_benign | 0.1607 | benign | -0.266 | Destabilizing | 0.001 | N | 0.137 | neutral | None | None | None | None | I |
M/R | 0.1807 | likely_benign | 0.1505 | benign | 0.321 | Stabilizing | 0.014 | N | 0.479 | neutral | N | 0.501733773 | None | None | I |
M/S | 0.2187 | likely_benign | 0.1695 | benign | -0.643 | Destabilizing | None | N | 0.159 | neutral | None | None | None | None | I |
M/T | 0.1327 | likely_benign | 0.0962 | benign | -0.553 | Destabilizing | None | N | 0.169 | neutral | N | 0.436740932 | None | None | I |
M/V | 0.0788 | likely_benign | 0.0727 | benign | -0.78 | Destabilizing | None | N | 0.119 | neutral | N | 0.442090823 | None | None | I |
M/W | 0.5094 | ambiguous | 0.463 | ambiguous | -0.348 | Destabilizing | None | N | 0.186 | neutral | None | None | None | None | I |
M/Y | 0.474 | ambiguous | 0.4073 | ambiguous | -0.328 | Destabilizing | 0.044 | N | 0.487 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.