Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6938 | 21037;21038;21039 | chr2:178725392;178725391;178725390 | chr2:179590119;179590118;179590117 |
N2AB | 6621 | 20086;20087;20088 | chr2:178725392;178725391;178725390 | chr2:179590119;179590118;179590117 |
N2A | 5694 | 17305;17306;17307 | chr2:178725392;178725391;178725390 | chr2:179590119;179590118;179590117 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | None | None | 0.081 | N | 0.444 | 0.128 | 0.201204373187 | gnomAD-4.0.0 | 1.65252E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.53827E-05 | 0 |
N/Y | rs769865946 | 0.055 | 0.602 | N | 0.611 | 0.275 | 0.609517086792 | gnomAD-2.1.1 | 4.46E-06 | None | None | None | None | N | None | 6.85E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
N/Y | rs769865946 | 0.055 | 0.602 | N | 0.611 | 0.275 | 0.609517086792 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/Y | rs769865946 | 0.055 | 0.602 | N | 0.611 | 0.275 | 0.609517086792 | gnomAD-4.0.0 | 6.57065E-06 | None | None | None | None | N | None | 2.41208E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2173 | likely_benign | 0.2001 | benign | -1.02 | Destabilizing | 0.025 | N | 0.538 | neutral | None | None | None | None | N |
N/C | 0.1216 | likely_benign | 0.135 | benign | -0.081 | Destabilizing | None | N | 0.478 | neutral | None | None | None | None | N |
N/D | 0.2392 | likely_benign | 0.2339 | benign | -0.912 | Destabilizing | 0.081 | N | 0.444 | neutral | N | 0.467757272 | None | None | N |
N/E | 0.5308 | ambiguous | 0.517 | ambiguous | -0.711 | Destabilizing | 0.124 | N | 0.45 | neutral | None | None | None | None | N |
N/F | 0.6442 | likely_pathogenic | 0.6096 | pathogenic | -0.4 | Destabilizing | 0.667 | D | 0.658 | neutral | None | None | None | None | N |
N/G | 0.2818 | likely_benign | 0.2574 | benign | -1.437 | Destabilizing | 0.055 | N | 0.413 | neutral | None | None | None | None | N |
N/H | 0.16 | likely_benign | 0.1522 | benign | -0.843 | Destabilizing | 0.602 | D | 0.56 | neutral | N | 0.457060276 | None | None | N |
N/I | 0.2368 | likely_benign | 0.2282 | benign | 0.097 | Stabilizing | 0.096 | N | 0.618 | neutral | N | 0.449075511 | None | None | N |
N/K | 0.5766 | likely_pathogenic | 0.5299 | ambiguous | -0.227 | Destabilizing | 0.096 | N | 0.43 | neutral | N | 0.435700782 | None | None | N |
N/L | 0.3278 | likely_benign | 0.3115 | benign | 0.097 | Stabilizing | 0.055 | N | 0.562 | neutral | None | None | None | None | N |
N/M | 0.3343 | likely_benign | 0.3259 | benign | 0.35 | Stabilizing | 0.667 | D | 0.596 | neutral | None | None | None | None | N |
N/P | 0.9601 | likely_pathogenic | 0.9577 | pathogenic | -0.247 | Destabilizing | 0.364 | N | 0.609 | neutral | None | None | None | None | N |
N/Q | 0.4458 | ambiguous | 0.4225 | ambiguous | -0.674 | Destabilizing | 0.22 | N | 0.55 | neutral | None | None | None | None | N |
N/R | 0.6159 | likely_pathogenic | 0.5774 | pathogenic | -0.387 | Destabilizing | 0.22 | N | 0.527 | neutral | None | None | None | None | N |
N/S | 0.0867 | likely_benign | 0.0794 | benign | -1.093 | Destabilizing | None | N | 0.203 | neutral | N | 0.384850674 | None | None | N |
N/T | 0.1207 | likely_benign | 0.1151 | benign | -0.688 | Destabilizing | None | N | 0.197 | neutral | N | 0.412133276 | None | None | N |
N/V | 0.226 | likely_benign | 0.2208 | benign | -0.247 | Destabilizing | 0.055 | N | 0.559 | neutral | None | None | None | None | N |
N/W | 0.8331 | likely_pathogenic | 0.8242 | pathogenic | -0.178 | Destabilizing | 0.958 | D | 0.633 | neutral | None | None | None | None | N |
N/Y | 0.1706 | likely_benign | 0.1743 | benign | 0.075 | Stabilizing | 0.602 | D | 0.611 | neutral | N | 0.457406992 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.