Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6940 | 21043;21044;21045 | chr2:178725386;178725385;178725384 | chr2:179590113;179590112;179590111 |
N2AB | 6623 | 20092;20093;20094 | chr2:178725386;178725385;178725384 | chr2:179590113;179590112;179590111 |
N2A | 5696 | 17311;17312;17313 | chr2:178725386;178725385;178725384 | chr2:179590113;179590112;179590111 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.775 | N | 0.355 | 0.441 | 0.362361684037 | gnomAD-4.0.0 | 1.67561E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.0051E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7586 | likely_pathogenic | 0.765 | pathogenic | -1.178 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
A/D | 0.9013 | likely_pathogenic | 0.9209 | pathogenic | -1.842 | Destabilizing | 0.997 | D | 0.799 | deleterious | D | 0.545319283 | None | None | N |
A/E | 0.9213 | likely_pathogenic | 0.9403 | pathogenic | -1.794 | Destabilizing | 0.998 | D | 0.752 | deleterious | None | None | None | None | N |
A/F | 0.9067 | likely_pathogenic | 0.9162 | pathogenic | -1.068 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
A/G | 0.2028 | likely_benign | 0.2067 | benign | -1.512 | Destabilizing | 0.989 | D | 0.491 | neutral | D | 0.522188598 | None | None | N |
A/H | 0.97 | likely_pathogenic | 0.9749 | pathogenic | -1.773 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
A/I | 0.7951 | likely_pathogenic | 0.8162 | pathogenic | -0.291 | Destabilizing | 0.998 | D | 0.8 | deleterious | None | None | None | None | N |
A/K | 0.9802 | likely_pathogenic | 0.9854 | pathogenic | -1.43 | Destabilizing | 0.998 | D | 0.752 | deleterious | None | None | None | None | N |
A/L | 0.7131 | likely_pathogenic | 0.7382 | pathogenic | -0.291 | Destabilizing | 0.992 | D | 0.683 | prob.neutral | None | None | None | None | N |
A/M | 0.749 | likely_pathogenic | 0.7711 | pathogenic | -0.25 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
A/N | 0.8829 | likely_pathogenic | 0.8954 | pathogenic | -1.318 | Destabilizing | 0.998 | D | 0.835 | deleterious | None | None | None | None | N |
A/P | 0.9848 | likely_pathogenic | 0.988 | pathogenic | -0.536 | Destabilizing | 0.998 | D | 0.807 | deleterious | D | 0.527215028 | None | None | N |
A/Q | 0.9256 | likely_pathogenic | 0.9409 | pathogenic | -1.374 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
A/R | 0.9651 | likely_pathogenic | 0.973 | pathogenic | -1.188 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
A/S | 0.2072 | likely_benign | 0.2132 | benign | -1.721 | Destabilizing | 0.775 | D | 0.355 | neutral | N | 0.507589835 | None | None | N |
A/T | 0.2735 | likely_benign | 0.2992 | benign | -1.566 | Destabilizing | 0.733 | D | 0.36 | neutral | N | 0.507336346 | None | None | N |
A/V | 0.4521 | ambiguous | 0.4869 | ambiguous | -0.536 | Destabilizing | 0.989 | D | 0.565 | neutral | N | 0.496292301 | None | None | N |
A/W | 0.9914 | likely_pathogenic | 0.9926 | pathogenic | -1.569 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
A/Y | 0.9621 | likely_pathogenic | 0.9654 | pathogenic | -1.124 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.