Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6944 | 21055;21056;21057 | chr2:178725374;178725373;178725372 | chr2:179590101;179590100;179590099 |
N2AB | 6627 | 20104;20105;20106 | chr2:178725374;178725373;178725372 | chr2:179590101;179590100;179590099 |
N2A | 5700 | 17323;17324;17325 | chr2:178725374;178725373;178725372 | chr2:179590101;179590100;179590099 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | rs1278982841 | -1.75 | 0.997 | D | 0.811 | 0.883 | 0.938277259092 | gnomAD-2.1.1 | 5.17E-06 | None | None | None | None | N | None | 0 | 3.45E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/D | rs1278982841 | -1.75 | 0.997 | D | 0.811 | 0.883 | 0.938277259092 | gnomAD-4.0.0 | 3.47205E-06 | None | None | None | None | N | None | 0 | 5.22057E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/F | rs2079162110 | None | 0.982 | D | 0.783 | 0.614 | 0.915955184925 | gnomAD-4.0.0 | 1.73095E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.10064E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7692 | likely_pathogenic | 0.7754 | pathogenic | -1.85 | Destabilizing | 0.939 | D | 0.651 | neutral | D | 0.601105986 | None | None | N |
V/C | 0.9574 | likely_pathogenic | 0.9515 | pathogenic | -1.293 | Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
V/D | 0.9756 | likely_pathogenic | 0.982 | pathogenic | -2.142 | Highly Destabilizing | 0.997 | D | 0.811 | deleterious | D | 0.617962925 | None | None | N |
V/E | 0.9411 | likely_pathogenic | 0.9502 | pathogenic | -2.09 | Highly Destabilizing | 0.998 | D | 0.787 | deleterious | None | None | None | None | N |
V/F | 0.5577 | ambiguous | 0.5681 | pathogenic | -1.34 | Destabilizing | 0.982 | D | 0.783 | deleterious | D | 0.617357512 | None | None | N |
V/G | 0.8234 | likely_pathogenic | 0.8469 | pathogenic | -2.217 | Highly Destabilizing | 0.997 | D | 0.799 | deleterious | D | 0.617962925 | None | None | N |
V/H | 0.983 | likely_pathogenic | 0.9838 | pathogenic | -1.794 | Destabilizing | 0.999 | D | 0.783 | deleterious | None | None | None | None | N |
V/I | 0.0871 | likely_benign | 0.0834 | benign | -0.9 | Destabilizing | 0.046 | N | 0.462 | neutral | N | 0.503611179 | None | None | N |
V/K | 0.9719 | likely_pathogenic | 0.9758 | pathogenic | -1.481 | Destabilizing | 0.993 | D | 0.787 | deleterious | None | None | None | None | N |
V/L | 0.3569 | ambiguous | 0.3139 | benign | -0.9 | Destabilizing | 0.76 | D | 0.664 | neutral | D | 0.599087944 | None | None | N |
V/M | 0.4879 | ambiguous | 0.4678 | ambiguous | -0.753 | Destabilizing | 0.986 | D | 0.774 | deleterious | None | None | None | None | N |
V/N | 0.9297 | likely_pathogenic | 0.9446 | pathogenic | -1.402 | Destabilizing | 0.998 | D | 0.817 | deleterious | None | None | None | None | N |
V/P | 0.9565 | likely_pathogenic | 0.9552 | pathogenic | -1.186 | Destabilizing | 0.998 | D | 0.794 | deleterious | None | None | None | None | N |
V/Q | 0.9557 | likely_pathogenic | 0.9607 | pathogenic | -1.532 | Destabilizing | 0.998 | D | 0.797 | deleterious | None | None | None | None | N |
V/R | 0.9545 | likely_pathogenic | 0.9617 | pathogenic | -1.019 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
V/S | 0.8878 | likely_pathogenic | 0.9056 | pathogenic | -1.927 | Destabilizing | 0.993 | D | 0.777 | deleterious | None | None | None | None | N |
V/T | 0.8174 | likely_pathogenic | 0.8194 | pathogenic | -1.771 | Destabilizing | 0.953 | D | 0.745 | deleterious | None | None | None | None | N |
V/W | 0.9852 | likely_pathogenic | 0.9845 | pathogenic | -1.629 | Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
V/Y | 0.9378 | likely_pathogenic | 0.9374 | pathogenic | -1.332 | Destabilizing | 0.998 | D | 0.782 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.