Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6949 | 21070;21071;21072 | chr2:178724530;178724529;178724528 | chr2:179589257;179589256;179589255 |
N2AB | 6632 | 20119;20120;20121 | chr2:178724530;178724529;178724528 | chr2:179589257;179589256;179589255 |
N2A | 5705 | 17338;17339;17340 | chr2:178724530;178724529;178724528 | chr2:179589257;179589256;179589255 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.27 | N | 0.316 | 0.08 | 0.152612264143 | gnomAD-4.0.0 | 6.9812E-07 | None | None | None | None | N | None | 0 | 0 | None | 4.0235E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1101 | likely_benign | 0.1117 | benign | -0.683 | Destabilizing | 0.01 | N | 0.132 | neutral | N | 0.456323117 | None | None | N |
V/C | 0.636 | likely_pathogenic | 0.6304 | pathogenic | -0.795 | Destabilizing | 0.995 | D | 0.446 | neutral | None | None | None | None | N |
V/D | 0.199 | likely_benign | 0.2088 | benign | -0.066 | Destabilizing | 0.006 | N | 0.393 | neutral | N | 0.479295977 | None | None | N |
V/E | 0.147 | likely_benign | 0.1541 | benign | -0.129 | Destabilizing | 0.031 | N | 0.371 | neutral | None | None | None | None | N |
V/F | 0.1183 | likely_benign | 0.1242 | benign | -0.603 | Destabilizing | 0.927 | D | 0.476 | neutral | N | 0.509445526 | None | None | N |
V/G | 0.1548 | likely_benign | 0.1696 | benign | -0.89 | Destabilizing | 0.27 | N | 0.414 | neutral | N | 0.477389036 | None | None | N |
V/H | 0.3545 | ambiguous | 0.3456 | ambiguous | -0.381 | Destabilizing | 0.981 | D | 0.47 | neutral | None | None | None | None | N |
V/I | 0.0692 | likely_benign | 0.0713 | benign | -0.269 | Destabilizing | 0.642 | D | 0.357 | neutral | N | 0.471927288 | None | None | N |
V/K | 0.1778 | likely_benign | 0.1746 | benign | -0.548 | Destabilizing | 0.013 | N | 0.323 | neutral | None | None | None | None | N |
V/L | 0.1208 | likely_benign | 0.1239 | benign | -0.269 | Destabilizing | 0.27 | N | 0.316 | neutral | N | 0.44402861 | None | None | N |
V/M | 0.0966 | likely_benign | 0.0988 | benign | -0.385 | Destabilizing | 0.981 | D | 0.431 | neutral | None | None | None | None | N |
V/N | 0.1441 | likely_benign | 0.1461 | benign | -0.388 | Destabilizing | 0.704 | D | 0.495 | neutral | None | None | None | None | N |
V/P | 0.8149 | likely_pathogenic | 0.833 | pathogenic | -0.37 | Destabilizing | 0.828 | D | 0.512 | neutral | None | None | None | None | N |
V/Q | 0.1802 | likely_benign | 0.1756 | benign | -0.556 | Destabilizing | 0.704 | D | 0.512 | neutral | None | None | None | None | N |
V/R | 0.1491 | likely_benign | 0.1471 | benign | -0.105 | Destabilizing | 0.543 | D | 0.497 | neutral | None | None | None | None | N |
V/S | 0.1271 | likely_benign | 0.1264 | benign | -0.878 | Destabilizing | 0.329 | N | 0.373 | neutral | None | None | None | None | N |
V/T | 0.1071 | likely_benign | 0.1057 | benign | -0.827 | Destabilizing | 0.031 | N | 0.141 | neutral | None | None | None | None | N |
V/W | 0.6778 | likely_pathogenic | 0.6787 | pathogenic | -0.702 | Destabilizing | 0.995 | D | 0.5 | neutral | None | None | None | None | N |
V/Y | 0.3773 | ambiguous | 0.3683 | ambiguous | -0.398 | Destabilizing | 0.981 | D | 0.472 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.