Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6953 | 21082;21083;21084 | chr2:178724518;178724517;178724516 | chr2:179589245;179589244;179589243 |
N2AB | 6636 | 20131;20132;20133 | chr2:178724518;178724517;178724516 | chr2:179589245;179589244;179589243 |
N2A | 5709 | 17350;17351;17352 | chr2:178724518;178724517;178724516 | chr2:179589245;179589244;179589243 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.219 | N | 0.143 | 0.173 | 0.338592109245 | gnomAD-4.0.0 | 4.15281E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.54147E-06 | 0 | 1.67915E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2918 | likely_benign | 0.3253 | benign | -0.077 | Destabilizing | 0.985 | D | 0.537 | neutral | None | None | None | None | N |
K/C | 0.8171 | likely_pathogenic | 0.841 | pathogenic | -0.204 | Destabilizing | 1.0 | D | 0.666 | neutral | None | None | None | None | N |
K/D | 0.4819 | ambiguous | 0.5153 | ambiguous | 0.184 | Stabilizing | 0.971 | D | 0.521 | neutral | None | None | None | None | N |
K/E | 0.1147 | likely_benign | 0.1343 | benign | 0.204 | Stabilizing | 0.219 | N | 0.143 | neutral | N | 0.501563201 | None | None | N |
K/F | 0.8046 | likely_pathogenic | 0.8337 | pathogenic | -0.217 | Destabilizing | 0.999 | D | 0.632 | neutral | None | None | None | None | N |
K/G | 0.4238 | ambiguous | 0.4595 | ambiguous | -0.307 | Destabilizing | 0.993 | D | 0.519 | neutral | None | None | None | None | N |
K/H | 0.3974 | ambiguous | 0.4324 | ambiguous | -0.649 | Destabilizing | 0.999 | D | 0.545 | neutral | None | None | None | None | N |
K/I | 0.4183 | ambiguous | 0.4576 | ambiguous | 0.455 | Stabilizing | 0.999 | D | 0.629 | neutral | None | None | None | None | N |
K/L | 0.4006 | ambiguous | 0.4533 | ambiguous | 0.455 | Stabilizing | 0.993 | D | 0.493 | neutral | None | None | None | None | N |
K/M | 0.191 | likely_benign | 0.2235 | benign | 0.287 | Stabilizing | 1.0 | D | 0.549 | neutral | N | 0.510068143 | None | None | N |
K/N | 0.33 | likely_benign | 0.3711 | ambiguous | 0.225 | Stabilizing | 0.99 | D | 0.475 | neutral | N | 0.521997188 | None | None | N |
K/P | 0.4884 | ambiguous | 0.4833 | ambiguous | 0.307 | Stabilizing | 0.999 | D | 0.481 | neutral | None | None | None | None | N |
K/Q | 0.1272 | likely_benign | 0.1412 | benign | 0.046 | Stabilizing | 0.98 | D | 0.528 | neutral | N | 0.490692847 | None | None | N |
K/R | 0.1078 | likely_benign | 0.1088 | benign | -0.078 | Destabilizing | 0.98 | D | 0.477 | neutral | N | 0.502083276 | None | None | N |
K/S | 0.3584 | ambiguous | 0.4079 | ambiguous | -0.321 | Destabilizing | 0.985 | D | 0.501 | neutral | None | None | None | None | N |
K/T | 0.1459 | likely_benign | 0.1677 | benign | -0.14 | Destabilizing | 0.99 | D | 0.501 | neutral | N | 0.515551219 | None | None | N |
K/V | 0.3737 | ambiguous | 0.4062 | ambiguous | 0.307 | Stabilizing | 0.998 | D | 0.474 | neutral | None | None | None | None | N |
K/W | 0.8394 | likely_pathogenic | 0.8535 | pathogenic | -0.185 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | None | None | None | None | N |
K/Y | 0.6485 | likely_pathogenic | 0.6794 | pathogenic | 0.164 | Stabilizing | 0.999 | D | 0.61 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.