Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6963 | 21112;21113;21114 | chr2:178724488;178724487;178724486 | chr2:179589215;179589214;179589213 |
N2AB | 6646 | 20161;20162;20163 | chr2:178724488;178724487;178724486 | chr2:179589215;179589214;179589213 |
N2A | 5719 | 17380;17381;17382 | chr2:178724488;178724487;178724486 | chr2:179589215;179589214;179589213 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.549 | N | 0.356 | 0.231 | 0.199424873507 | gnomAD-4.0.0 | 6.86362E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02346E-07 | 0 | 0 |
E/Q | None | None | 0.712 | N | 0.411 | 0.215 | 0.130388298395 | gnomAD-4.0.0 | 6.86362E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02346E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.252 | likely_benign | 0.2476 | benign | -0.468 | Destabilizing | 0.334 | N | 0.297 | neutral | N | 0.457608353 | None | None | N |
E/C | 0.9152 | likely_pathogenic | 0.9218 | pathogenic | 0.008 | Stabilizing | 0.012 | N | 0.386 | neutral | None | None | None | None | N |
E/D | 0.0817 | likely_benign | 0.0948 | benign | -0.401 | Destabilizing | 0.001 | N | 0.159 | neutral | N | 0.481317562 | None | None | N |
E/F | 0.8514 | likely_pathogenic | 0.8536 | pathogenic | -0.327 | Destabilizing | 0.972 | D | 0.434 | neutral | None | None | None | None | N |
E/G | 0.1804 | likely_benign | 0.1815 | benign | -0.677 | Destabilizing | 0.549 | D | 0.371 | neutral | N | 0.501020831 | None | None | N |
E/H | 0.5589 | ambiguous | 0.5572 | ambiguous | -0.166 | Destabilizing | 0.972 | D | 0.313 | neutral | None | None | None | None | N |
E/I | 0.7044 | likely_pathogenic | 0.7142 | pathogenic | 0.054 | Stabilizing | 0.92 | D | 0.442 | neutral | None | None | None | None | N |
E/K | 0.2299 | likely_benign | 0.2262 | benign | 0.373 | Stabilizing | 0.549 | D | 0.356 | neutral | N | 0.511160467 | None | None | N |
E/L | 0.6373 | likely_pathogenic | 0.6369 | pathogenic | 0.054 | Stabilizing | 0.617 | D | 0.417 | neutral | None | None | None | None | N |
E/M | 0.6265 | likely_pathogenic | 0.6237 | pathogenic | 0.236 | Stabilizing | 0.992 | D | 0.413 | neutral | None | None | None | None | N |
E/N | 0.2006 | likely_benign | 0.2101 | benign | -0.022 | Destabilizing | 0.447 | N | 0.353 | neutral | None | None | None | None | N |
E/P | 0.9476 | likely_pathogenic | 0.9554 | pathogenic | -0.099 | Destabilizing | 0.92 | D | 0.339 | neutral | None | None | None | None | N |
E/Q | 0.178 | likely_benign | 0.1648 | benign | 0.016 | Stabilizing | 0.712 | D | 0.411 | neutral | N | 0.486936813 | None | None | N |
E/R | 0.3654 | ambiguous | 0.372 | ambiguous | 0.536 | Stabilizing | 0.92 | D | 0.346 | neutral | None | None | None | None | N |
E/S | 0.2154 | likely_benign | 0.2187 | benign | -0.169 | Destabilizing | 0.617 | D | 0.303 | neutral | None | None | None | None | N |
E/T | 0.3733 | ambiguous | 0.3734 | ambiguous | 0.006 | Stabilizing | 0.617 | D | 0.351 | neutral | None | None | None | None | N |
E/V | 0.4629 | ambiguous | 0.468 | ambiguous | -0.099 | Destabilizing | 0.549 | D | 0.399 | neutral | N | 0.473359204 | None | None | N |
E/W | 0.945 | likely_pathogenic | 0.9455 | pathogenic | -0.15 | Destabilizing | 0.992 | D | 0.575 | neutral | None | None | None | None | N |
E/Y | 0.7106 | likely_pathogenic | 0.7177 | pathogenic | -0.071 | Destabilizing | 0.972 | D | 0.412 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.