Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6964 | 21115;21116;21117 | chr2:178724485;178724484;178724483 | chr2:179589212;179589211;179589210 |
N2AB | 6647 | 20164;20165;20166 | chr2:178724485;178724484;178724483 | chr2:179589212;179589211;179589210 |
N2A | 5720 | 17383;17384;17385 | chr2:178724485;178724484;178724483 | chr2:179589212;179589211;179589210 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/M | rs765257439 | 0.043 | 0.086 | N | 0.285 | 0.11 | 0.366848117066 | gnomAD-2.1.1 | 6.86E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 5.24418E-04 | None | 0 | 8.91E-06 | 0 |
T/M | rs765257439 | 0.043 | 0.086 | N | 0.285 | 0.11 | 0.366848117066 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/M | rs765257439 | 0.043 | 0.086 | N | 0.285 | 0.11 | 0.366848117066 | gnomAD-4.0.0 | 3.41182E-05 | None | None | None | None | N | None | 1.3364E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 7.63575E-06 | 4.83729E-04 | 1.60339E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0821 | likely_benign | 0.0772 | benign | -0.882 | Destabilizing | 0.001 | N | 0.083 | neutral | N | 0.49978868 | None | None | N |
T/C | 0.525 | ambiguous | 0.4735 | ambiguous | -0.487 | Destabilizing | 0.94 | D | 0.351 | neutral | None | None | None | None | N |
T/D | 0.334 | likely_benign | 0.2991 | benign | -0.075 | Destabilizing | 0.593 | D | 0.404 | neutral | None | None | None | None | N |
T/E | 0.3147 | likely_benign | 0.2814 | benign | -0.061 | Destabilizing | 0.418 | N | 0.352 | neutral | None | None | None | None | N |
T/F | 0.2506 | likely_benign | 0.2061 | benign | -0.925 | Destabilizing | 0.716 | D | 0.426 | neutral | None | None | None | None | N |
T/G | 0.2659 | likely_benign | 0.2237 | benign | -1.156 | Destabilizing | 0.264 | N | 0.407 | neutral | None | None | None | None | N |
T/H | 0.2802 | likely_benign | 0.2453 | benign | -1.383 | Destabilizing | 0.983 | D | 0.361 | neutral | None | None | None | None | N |
T/I | 0.1579 | likely_benign | 0.1386 | benign | -0.24 | Destabilizing | 0.002 | N | 0.234 | neutral | None | None | None | None | N |
T/K | 0.2459 | likely_benign | 0.2168 | benign | -0.639 | Destabilizing | 0.579 | D | 0.363 | neutral | N | 0.493073351 | None | None | N |
T/L | 0.1131 | likely_benign | 0.1032 | benign | -0.24 | Destabilizing | 0.022 | N | 0.324 | neutral | None | None | None | None | N |
T/M | 0.0903 | likely_benign | 0.0821 | benign | 0.075 | Stabilizing | 0.086 | N | 0.285 | neutral | N | 0.515470208 | None | None | N |
T/N | 0.0966 | likely_benign | 0.086 | benign | -0.605 | Destabilizing | 0.836 | D | 0.356 | neutral | None | None | None | None | N |
T/P | 0.088 | likely_benign | 0.0862 | benign | -0.422 | Destabilizing | 0.001 | N | 0.179 | neutral | N | 0.451341372 | None | None | N |
T/Q | 0.2441 | likely_benign | 0.22 | benign | -0.747 | Destabilizing | 0.836 | D | 0.409 | neutral | None | None | None | None | N |
T/R | 0.1978 | likely_benign | 0.1782 | benign | -0.438 | Destabilizing | 0.828 | D | 0.411 | neutral | N | 0.492611991 | None | None | N |
T/S | 0.1045 | likely_benign | 0.0929 | benign | -0.946 | Destabilizing | 0.101 | N | 0.313 | neutral | N | 0.460286142 | None | None | N |
T/V | 0.1453 | likely_benign | 0.1257 | benign | -0.422 | Destabilizing | 0.001 | N | 0.099 | neutral | None | None | None | None | N |
T/W | 0.6148 | likely_pathogenic | 0.563 | ambiguous | -0.835 | Destabilizing | 0.983 | D | 0.406 | neutral | None | None | None | None | N |
T/Y | 0.2555 | likely_benign | 0.2315 | benign | -0.604 | Destabilizing | 0.836 | D | 0.394 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.