Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6967 | 21124;21125;21126 | chr2:178724476;178724475;178724474 | chr2:179589203;179589202;179589201 |
N2AB | 6650 | 20173;20174;20175 | chr2:178724476;178724475;178724474 | chr2:179589203;179589202;179589201 |
N2A | 5723 | 17392;17393;17394 | chr2:178724476;178724475;178724474 | chr2:179589203;179589202;179589201 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/V | None | None | 0.025 | D | 0.357 | 0.248 | 0.119812018005 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.865 | likely_pathogenic | 0.7765 | pathogenic | -2.634 | Highly Destabilizing | 0.845 | D | 0.718 | prob.delet. | None | None | None | None | N |
L/C | 0.9431 | likely_pathogenic | 0.9132 | pathogenic | -2.049 | Highly Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
L/D | 0.9986 | likely_pathogenic | 0.9975 | pathogenic | -2.942 | Highly Destabilizing | 0.996 | D | 0.865 | deleterious | None | None | None | None | N |
L/E | 0.9862 | likely_pathogenic | 0.9768 | pathogenic | -2.675 | Highly Destabilizing | 0.987 | D | 0.875 | deleterious | None | None | None | None | N |
L/F | 0.261 | likely_benign | 0.2109 | benign | -1.56 | Destabilizing | 0.975 | D | 0.724 | prob.delet. | None | None | None | None | N |
L/G | 0.9821 | likely_pathogenic | 0.9714 | pathogenic | -3.231 | Highly Destabilizing | 0.987 | D | 0.873 | deleterious | None | None | None | None | N |
L/H | 0.9671 | likely_pathogenic | 0.9504 | pathogenic | -2.7 | Highly Destabilizing | 0.999 | D | 0.852 | deleterious | None | None | None | None | N |
L/I | 0.1611 | likely_benign | 0.1322 | benign | -0.883 | Destabilizing | 0.033 | N | 0.359 | neutral | None | None | None | None | N |
L/K | 0.9799 | likely_pathogenic | 0.9652 | pathogenic | -2.001 | Highly Destabilizing | 0.975 | D | 0.856 | deleterious | None | None | None | None | N |
L/M | 0.1956 | likely_benign | 0.138 | benign | -0.931 | Destabilizing | 0.63 | D | 0.521 | neutral | D | 0.543430943 | None | None | N |
L/N | 0.9931 | likely_pathogenic | 0.9876 | pathogenic | -2.426 | Highly Destabilizing | 0.987 | D | 0.877 | deleterious | None | None | None | None | N |
L/P | 0.9913 | likely_pathogenic | 0.9878 | pathogenic | -1.45 | Destabilizing | 0.994 | D | 0.865 | deleterious | D | 0.621952597 | None | None | N |
L/Q | 0.9489 | likely_pathogenic | 0.9109 | pathogenic | -2.218 | Highly Destabilizing | 0.983 | D | 0.857 | deleterious | D | 0.621952597 | None | None | N |
L/R | 0.9566 | likely_pathogenic | 0.9351 | pathogenic | -1.857 | Destabilizing | 0.967 | D | 0.854 | deleterious | D | 0.621952597 | None | None | N |
L/S | 0.976 | likely_pathogenic | 0.9522 | pathogenic | -3.164 | Highly Destabilizing | 0.975 | D | 0.847 | deleterious | None | None | None | None | N |
L/T | 0.9114 | likely_pathogenic | 0.8309 | pathogenic | -2.728 | Highly Destabilizing | 0.975 | D | 0.788 | deleterious | None | None | None | None | N |
L/V | 0.2019 | likely_benign | 0.1446 | benign | -1.45 | Destabilizing | 0.025 | N | 0.357 | neutral | D | 0.55524098 | None | None | N |
L/W | 0.7689 | likely_pathogenic | 0.6984 | pathogenic | -1.926 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
L/Y | 0.8933 | likely_pathogenic | 0.8502 | pathogenic | -1.654 | Destabilizing | 0.987 | D | 0.756 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.