Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6968 | 21127;21128;21129 | chr2:178724473;178724472;178724471 | chr2:179589200;179589199;179589198 |
N2AB | 6651 | 20176;20177;20178 | chr2:178724473;178724472;178724471 | chr2:179589200;179589199;179589198 |
N2A | 5724 | 17395;17396;17397 | chr2:178724473;178724472;178724471 | chr2:179589200;179589199;179589198 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 1.0 | D | 0.729 | 0.607 | 0.735594876934 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3024 | likely_benign | 0.2937 | benign | -0.812 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | N | 0.508721247 | None | None | N |
E/C | 0.9485 | likely_pathogenic | 0.9503 | pathogenic | -0.188 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
E/D | 0.3387 | likely_benign | 0.2696 | benign | -0.855 | Destabilizing | 0.999 | D | 0.531 | neutral | N | 0.496600099 | None | None | N |
E/F | 0.8869 | likely_pathogenic | 0.8808 | pathogenic | -0.631 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
E/G | 0.4219 | ambiguous | 0.3979 | ambiguous | -1.1 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | D | 0.535889206 | None | None | N |
E/H | 0.6995 | likely_pathogenic | 0.6929 | pathogenic | -0.825 | Destabilizing | 1.0 | D | 0.748 | deleterious | None | None | None | None | N |
E/I | 0.5791 | likely_pathogenic | 0.57 | pathogenic | -0.052 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
E/K | 0.3954 | ambiguous | 0.4157 | ambiguous | -0.141 | Destabilizing | 0.999 | D | 0.62 | neutral | N | 0.455233479 | None | None | N |
E/L | 0.6723 | likely_pathogenic | 0.6558 | pathogenic | -0.052 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/M | 0.6853 | likely_pathogenic | 0.6871 | pathogenic | 0.423 | Stabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
E/N | 0.573 | likely_pathogenic | 0.5175 | ambiguous | -0.534 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/P | 0.9729 | likely_pathogenic | 0.9391 | pathogenic | -0.285 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/Q | 0.1963 | likely_benign | 0.2015 | benign | -0.478 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.48978877 | None | None | N |
E/R | 0.5229 | ambiguous | 0.5429 | ambiguous | -0.009 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
E/S | 0.3822 | ambiguous | 0.3564 | ambiguous | -0.778 | Destabilizing | 0.999 | D | 0.674 | neutral | None | None | None | None | N |
E/T | 0.375 | ambiguous | 0.3627 | ambiguous | -0.537 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
E/V | 0.3651 | ambiguous | 0.361 | ambiguous | -0.285 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.503200784 | None | None | N |
E/W | 0.9608 | likely_pathogenic | 0.9588 | pathogenic | -0.425 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/Y | 0.8365 | likely_pathogenic | 0.8192 | pathogenic | -0.37 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.