Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6972 | 21139;21140;21141 | chr2:178724461;178724460;178724459 | chr2:179589188;179589187;179589186 |
N2AB | 6655 | 20188;20189;20190 | chr2:178724461;178724460;178724459 | chr2:179589188;179589187;179589186 |
N2A | 5728 | 17407;17408;17409 | chr2:178724461;178724460;178724459 | chr2:179589188;179589187;179589186 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.062 | N | 0.12 | 0.203 | 0.185906805712 | gnomAD-4.0.0 | 4.77747E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.58163E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.5377 | ambiguous | 0.5675 | pathogenic | -0.84 | Destabilizing | 0.998 | D | 0.382 | neutral | None | None | None | None | N |
A/D | 0.1996 | likely_benign | 0.2191 | benign | -0.531 | Destabilizing | 0.934 | D | 0.389 | neutral | N | 0.433164696 | None | None | N |
A/E | 0.2063 | likely_benign | 0.2232 | benign | -0.584 | Destabilizing | 0.842 | D | 0.323 | neutral | None | None | None | None | N |
A/F | 0.2717 | likely_benign | 0.2825 | benign | -0.613 | Destabilizing | 0.949 | D | 0.431 | neutral | None | None | None | None | N |
A/G | 0.1601 | likely_benign | 0.1661 | benign | -0.641 | Destabilizing | 0.012 | N | 0.117 | neutral | N | 0.454060043 | None | None | N |
A/H | 0.4252 | ambiguous | 0.4409 | ambiguous | -0.605 | Destabilizing | 0.998 | D | 0.425 | neutral | None | None | None | None | N |
A/I | 0.2239 | likely_benign | 0.2308 | benign | -0.082 | Destabilizing | 0.904 | D | 0.337 | neutral | None | None | None | None | N |
A/K | 0.3982 | ambiguous | 0.4133 | ambiguous | -0.92 | Destabilizing | 0.842 | D | 0.322 | neutral | None | None | None | None | N |
A/L | 0.1649 | likely_benign | 0.174 | benign | -0.082 | Destabilizing | 0.016 | N | 0.245 | neutral | None | None | None | None | N |
A/M | 0.2028 | likely_benign | 0.2091 | benign | -0.321 | Destabilizing | 0.949 | D | 0.377 | neutral | None | None | None | None | N |
A/N | 0.2231 | likely_benign | 0.2281 | benign | -0.72 | Destabilizing | 0.949 | D | 0.392 | neutral | None | None | None | None | N |
A/P | 0.8793 | likely_pathogenic | 0.8981 | pathogenic | -0.162 | Destabilizing | 0.966 | D | 0.369 | neutral | N | 0.483862875 | None | None | N |
A/Q | 0.3096 | likely_benign | 0.3153 | benign | -0.847 | Destabilizing | 0.974 | D | 0.385 | neutral | None | None | None | None | N |
A/R | 0.323 | likely_benign | 0.3483 | ambiguous | -0.56 | Destabilizing | 0.974 | D | 0.367 | neutral | None | None | None | None | N |
A/S | 0.0831 | likely_benign | 0.0828 | benign | -1.035 | Destabilizing | 0.062 | N | 0.12 | neutral | N | 0.411498557 | None | None | N |
A/T | 0.076 | likely_benign | 0.0798 | benign | -0.983 | Destabilizing | 0.669 | D | 0.355 | neutral | N | 0.415346939 | None | None | N |
A/V | 0.1269 | likely_benign | 0.131 | benign | -0.162 | Destabilizing | 0.669 | D | 0.355 | neutral | N | 0.431356541 | None | None | N |
A/W | 0.6593 | likely_pathogenic | 0.6852 | pathogenic | -0.899 | Destabilizing | 0.998 | D | 0.567 | neutral | None | None | None | None | N |
A/Y | 0.4227 | ambiguous | 0.4331 | ambiguous | -0.493 | Destabilizing | 0.991 | D | 0.433 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.