Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6974 | 21145;21146;21147 | chr2:178724455;178724454;178724453 | chr2:179589182;179589181;179589180 |
N2AB | 6657 | 20194;20195;20196 | chr2:178724455;178724454;178724453 | chr2:179589182;179589181;179589180 |
N2A | 5730 | 17413;17414;17415 | chr2:178724455;178724454;178724453 | chr2:179589182;179589181;179589180 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/P | None | None | 0.999 | D | 0.672 | 0.444 | 0.649470034893 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
T/S | rs774828625 | -0.038 | 0.905 | N | 0.383 | 0.166 | 0.329282125956 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2479 | likely_benign | 0.1691 | benign | -0.165 | Destabilizing | 0.981 | D | 0.512 | neutral | N | 0.482380008 | None | None | I |
T/C | 0.8184 | likely_pathogenic | 0.7459 | pathogenic | -0.289 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | I |
T/D | 0.5592 | ambiguous | 0.4932 | ambiguous | 0.15 | Stabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | I |
T/E | 0.5915 | likely_pathogenic | 0.467 | ambiguous | 0.069 | Stabilizing | 0.999 | D | 0.617 | neutral | None | None | None | None | I |
T/F | 0.4117 | ambiguous | 0.2843 | benign | -0.731 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | I |
T/G | 0.5132 | ambiguous | 0.4483 | ambiguous | -0.261 | Destabilizing | 0.997 | D | 0.639 | neutral | None | None | None | None | I |
T/H | 0.4492 | ambiguous | 0.3518 | ambiguous | -0.408 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
T/I | 0.4731 | ambiguous | 0.3106 | benign | -0.033 | Destabilizing | 0.999 | D | 0.685 | prob.neutral | N | 0.486999181 | None | None | I |
T/K | 0.4602 | ambiguous | 0.3214 | benign | -0.26 | Destabilizing | 0.999 | D | 0.622 | neutral | None | None | None | None | I |
T/L | 0.2479 | likely_benign | 0.1645 | benign | -0.033 | Destabilizing | 0.998 | D | 0.61 | neutral | None | None | None | None | I |
T/M | 0.1733 | likely_benign | 0.1192 | benign | -0.091 | Destabilizing | 1.0 | D | 0.698 | prob.neutral | None | None | None | None | I |
T/N | 0.1943 | likely_benign | 0.1366 | benign | -0.03 | Destabilizing | 0.999 | D | 0.676 | prob.neutral | N | 0.456790917 | None | None | I |
T/P | 0.5557 | ambiguous | 0.5136 | ambiguous | -0.05 | Destabilizing | 0.999 | D | 0.672 | neutral | D | 0.53377162 | None | None | I |
T/Q | 0.4761 | ambiguous | 0.3466 | ambiguous | -0.235 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
T/R | 0.4456 | ambiguous | 0.3077 | benign | 0.043 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | I |
T/S | 0.1364 | likely_benign | 0.1131 | benign | -0.219 | Destabilizing | 0.905 | D | 0.383 | neutral | N | 0.467391913 | None | None | I |
T/V | 0.4127 | ambiguous | 0.2619 | benign | -0.05 | Destabilizing | 0.998 | D | 0.623 | neutral | None | None | None | None | I |
T/W | 0.7734 | likely_pathogenic | 0.695 | pathogenic | -0.8 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
T/Y | 0.4226 | ambiguous | 0.312 | benign | -0.483 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.