Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6983 | 21172;21173;21174 | chr2:178724428;178724427;178724426 | chr2:179589155;179589154;179589153 |
N2AB | 6666 | 20221;20222;20223 | chr2:178724428;178724427;178724426 | chr2:179589155;179589154;179589153 |
N2A | 5739 | 17440;17441;17442 | chr2:178724428;178724427;178724426 | chr2:179589155;179589154;179589153 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs2078983149 | None | 0.896 | N | 0.554 | 0.254 | 0.227934060464 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 9.41E-05 | 0 | 0 | 0 | 0 |
K/R | rs2078983149 | None | 0.896 | N | 0.554 | 0.254 | 0.227934060464 | gnomAD-4.0.0 | 6.57177E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.40734E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9341 | likely_pathogenic | 0.9264 | pathogenic | -1.073 | Destabilizing | 0.851 | D | 0.543 | neutral | None | None | None | None | N |
K/C | 0.9124 | likely_pathogenic | 0.8894 | pathogenic | -1.108 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
K/D | 0.9921 | likely_pathogenic | 0.9914 | pathogenic | -1.07 | Destabilizing | 0.976 | D | 0.659 | neutral | None | None | None | None | N |
K/E | 0.8114 | likely_pathogenic | 0.826 | pathogenic | -0.877 | Destabilizing | 0.896 | D | 0.515 | neutral | N | 0.509370812 | None | None | N |
K/F | 0.95 | likely_pathogenic | 0.9502 | pathogenic | -0.645 | Destabilizing | 0.976 | D | 0.797 | deleterious | None | None | None | None | N |
K/G | 0.9723 | likely_pathogenic | 0.9649 | pathogenic | -1.518 | Destabilizing | 0.976 | D | 0.672 | neutral | None | None | None | None | N |
K/H | 0.6251 | likely_pathogenic | 0.6185 | pathogenic | -1.913 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/I | 0.8252 | likely_pathogenic | 0.8327 | pathogenic | 0.135 | Stabilizing | 0.952 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/L | 0.77 | likely_pathogenic | 0.7707 | pathogenic | 0.135 | Stabilizing | 0.034 | N | 0.415 | neutral | None | None | None | None | N |
K/M | 0.6399 | likely_pathogenic | 0.6482 | pathogenic | 0.107 | Stabilizing | 0.968 | D | 0.705 | prob.neutral | N | 0.491013068 | None | None | N |
K/N | 0.9587 | likely_pathogenic | 0.9549 | pathogenic | -1.266 | Destabilizing | 0.968 | D | 0.549 | neutral | N | 0.486240128 | None | None | N |
K/P | 0.9981 | likely_pathogenic | 0.9977 | pathogenic | -0.24 | Destabilizing | 0.988 | D | 0.69 | prob.neutral | None | None | None | None | N |
K/Q | 0.4664 | ambiguous | 0.4623 | ambiguous | -1.176 | Destabilizing | 0.984 | D | 0.553 | neutral | N | 0.476516437 | None | None | N |
K/R | 0.1035 | likely_benign | 0.1026 | benign | -1.047 | Destabilizing | 0.896 | D | 0.554 | neutral | N | 0.421408041 | None | None | N |
K/S | 0.9593 | likely_pathogenic | 0.9513 | pathogenic | -1.888 | Destabilizing | 0.851 | D | 0.477 | neutral | None | None | None | None | N |
K/T | 0.9017 | likely_pathogenic | 0.8933 | pathogenic | -1.452 | Destabilizing | 0.026 | N | 0.333 | neutral | N | 0.479403273 | None | None | N |
K/V | 0.8074 | likely_pathogenic | 0.8108 | pathogenic | -0.24 | Destabilizing | 0.851 | D | 0.625 | neutral | None | None | None | None | N |
K/W | 0.9426 | likely_pathogenic | 0.9341 | pathogenic | -0.596 | Destabilizing | 0.999 | D | 0.777 | deleterious | None | None | None | None | N |
K/Y | 0.8842 | likely_pathogenic | 0.8835 | pathogenic | -0.258 | Destabilizing | 0.996 | D | 0.763 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.