Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6986 | 21181;21182;21183 | chr2:178724419;178724418;178724417 | chr2:179589146;179589145;179589144 |
N2AB | 6669 | 20230;20231;20232 | chr2:178724419;178724418;178724417 | chr2:179589146;179589145;179589144 |
N2A | 5742 | 17449;17450;17451 | chr2:178724419;178724418;178724417 | chr2:179589146;179589145;179589144 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs779709860 | 0.158 | 0.994 | N | 0.433 | 0.319 | 0.26547132957 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.65948E-04 |
K/N | rs779709860 | 0.158 | 0.994 | N | 0.433 | 0.319 | 0.26547132957 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs779709860 | 0.158 | 0.994 | N | 0.433 | 0.319 | 0.26547132957 | gnomAD-4.0.0 | 6.84348E-07 | None | None | None | None | N | None | 0 | 2.23754E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2725 | likely_benign | 0.2476 | benign | -0.027 | Destabilizing | 0.97 | D | 0.478 | neutral | None | None | None | None | N |
K/C | 0.5739 | likely_pathogenic | 0.5198 | ambiguous | -0.36 | Destabilizing | 1.0 | D | 0.616 | neutral | None | None | None | None | N |
K/D | 0.4206 | ambiguous | 0.3871 | ambiguous | 0.047 | Stabilizing | 0.942 | D | 0.445 | neutral | None | None | None | None | N |
K/E | 0.1147 | likely_benign | 0.1058 | benign | 0.075 | Stabilizing | 0.248 | N | 0.291 | neutral | N | 0.450152946 | None | None | N |
K/F | 0.5222 | ambiguous | 0.4573 | ambiguous | -0.157 | Destabilizing | 0.996 | D | 0.603 | neutral | None | None | None | None | N |
K/G | 0.4259 | ambiguous | 0.379 | ambiguous | -0.242 | Destabilizing | 0.985 | D | 0.459 | neutral | None | None | None | None | N |
K/H | 0.2012 | likely_benign | 0.1862 | benign | -0.406 | Destabilizing | 1.0 | D | 0.487 | neutral | None | None | None | None | N |
K/I | 0.1716 | likely_benign | 0.1542 | benign | 0.466 | Stabilizing | 0.983 | D | 0.537 | neutral | None | None | None | None | N |
K/L | 0.2218 | likely_benign | 0.1983 | benign | 0.466 | Stabilizing | 0.942 | D | 0.474 | neutral | None | None | None | None | N |
K/M | 0.1364 | likely_benign | 0.1256 | benign | 0.083 | Stabilizing | 0.998 | D | 0.487 | neutral | N | 0.515417933 | None | None | N |
K/N | 0.2085 | likely_benign | 0.1907 | benign | 0.021 | Stabilizing | 0.994 | D | 0.433 | neutral | N | 0.494618586 | None | None | N |
K/P | 0.9273 | likely_pathogenic | 0.9204 | pathogenic | 0.33 | Stabilizing | 0.999 | D | 0.485 | neutral | None | None | None | None | N |
K/Q | 0.0895 | likely_benign | 0.0854 | benign | -0.081 | Destabilizing | 0.989 | D | 0.445 | neutral | N | 0.465063683 | None | None | N |
K/R | 0.0792 | likely_benign | 0.0769 | benign | -0.113 | Destabilizing | 0.961 | D | 0.439 | neutral | N | 0.464103678 | None | None | N |
K/S | 0.2839 | likely_benign | 0.2497 | benign | -0.445 | Destabilizing | 0.97 | D | 0.446 | neutral | None | None | None | None | N |
K/T | 0.1292 | likely_benign | 0.1241 | benign | -0.262 | Destabilizing | 0.961 | D | 0.444 | neutral | N | 0.492559716 | None | None | N |
K/V | 0.1745 | likely_benign | 0.1537 | benign | 0.33 | Stabilizing | 0.503 | D | 0.352 | neutral | None | None | None | None | N |
K/W | 0.6643 | likely_pathogenic | 0.6035 | pathogenic | -0.198 | Destabilizing | 1.0 | D | 0.661 | neutral | None | None | None | None | N |
K/Y | 0.4192 | ambiguous | 0.3686 | ambiguous | 0.146 | Stabilizing | 0.999 | D | 0.563 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.