Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6987 | 21184;21185;21186 | chr2:178724416;178724415;178724414 | chr2:179589143;179589142;179589141 |
N2AB | 6670 | 20233;20234;20235 | chr2:178724416;178724415;178724414 | chr2:179589143;179589142;179589141 |
N2A | 5743 | 17452;17453;17454 | chr2:178724416;178724415;178724414 | chr2:179589143;179589142;179589141 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs375676942 | -0.637 | 0.966 | N | 0.409 | 0.307 | None | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | N | None | 1.6533E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
L/P | rs375676942 | -0.637 | 0.966 | N | 0.409 | 0.307 | None | gnomAD-3.1.2 | 3.94E-05 | None | None | None | None | N | None | 1.44725E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/P | rs375676942 | -0.637 | 0.966 | N | 0.409 | 0.307 | None | gnomAD-4.0.0 | 3.94348E-05 | None | None | None | None | N | None | 1.44725E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1398 | likely_benign | 0.1275 | benign | -1.075 | Destabilizing | 0.688 | D | 0.293 | neutral | None | None | None | None | N |
L/C | 0.3477 | ambiguous | 0.3462 | ambiguous | -0.702 | Destabilizing | 0.998 | D | 0.392 | neutral | None | None | None | None | N |
L/D | 0.5469 | ambiguous | 0.5454 | ambiguous | -0.202 | Destabilizing | 0.525 | D | 0.329 | neutral | None | None | None | None | N |
L/E | 0.177 | likely_benign | 0.1689 | benign | -0.204 | Destabilizing | 0.002 | N | 0.238 | neutral | None | None | None | None | N |
L/F | 0.1523 | likely_benign | 0.1528 | benign | -0.651 | Destabilizing | 0.991 | D | 0.366 | neutral | None | None | None | None | N |
L/G | 0.3854 | ambiguous | 0.3729 | ambiguous | -1.353 | Destabilizing | 0.842 | D | 0.347 | neutral | None | None | None | None | N |
L/H | 0.1498 | likely_benign | 0.1489 | benign | -0.437 | Destabilizing | 0.974 | D | 0.431 | neutral | None | None | None | None | N |
L/I | 0.0798 | likely_benign | 0.0782 | benign | -0.41 | Destabilizing | 0.915 | D | 0.281 | neutral | None | None | None | None | N |
L/K | 0.091 | likely_benign | 0.0839 | benign | -0.609 | Destabilizing | 0.525 | D | 0.304 | neutral | None | None | None | None | N |
L/M | 0.0937 | likely_benign | 0.0886 | benign | -0.481 | Destabilizing | 0.989 | D | 0.415 | neutral | N | 0.484478242 | None | None | N |
L/N | 0.2857 | likely_benign | 0.2707 | benign | -0.509 | Destabilizing | 0.842 | D | 0.375 | neutral | None | None | None | None | N |
L/P | 0.0886 | likely_benign | 0.0863 | benign | -0.599 | Destabilizing | 0.966 | D | 0.409 | neutral | N | 0.464754252 | None | None | N |
L/Q | 0.076 | likely_benign | 0.072 | benign | -0.622 | Destabilizing | 0.669 | D | 0.321 | neutral | N | 0.518511379 | None | None | N |
L/R | 0.0834 | likely_benign | 0.0771 | benign | -0.109 | Destabilizing | 0.801 | D | 0.34 | neutral | N | 0.507718382 | None | None | N |
L/S | 0.2093 | likely_benign | 0.2065 | benign | -1.106 | Destabilizing | 0.842 | D | 0.311 | neutral | None | None | None | None | N |
L/T | 0.1578 | likely_benign | 0.1547 | benign | -0.987 | Destabilizing | 0.842 | D | 0.27 | neutral | None | None | None | None | N |
L/V | 0.0776 | likely_benign | 0.0749 | benign | -0.599 | Destabilizing | 0.771 | D | 0.309 | neutral | N | 0.518300735 | None | None | N |
L/W | 0.2121 | likely_benign | 0.2189 | benign | -0.711 | Destabilizing | 0.998 | D | 0.469 | neutral | None | None | None | None | N |
L/Y | 0.2754 | likely_benign | 0.27 | benign | -0.466 | Destabilizing | 0.991 | D | 0.374 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.