Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6988 | 21187;21188;21189 | chr2:178724413;178724412;178724411 | chr2:179589140;179589139;179589138 |
N2AB | 6671 | 20236;20237;20238 | chr2:178724413;178724412;178724411 | chr2:179589140;179589139;179589138 |
N2A | 5744 | 17455;17456;17457 | chr2:178724413;178724412;178724411 | chr2:179589140;179589139;179589138 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs1159385830 | None | 1.0 | D | 0.806 | 0.745 | 0.889413966974 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 7.24E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/S | rs1159385830 | None | 1.0 | D | 0.806 | 0.745 | 0.889413966974 | gnomAD-4.0.0 | 2.62905E-05 | None | None | None | None | N | None | 7.23554E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.4708E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8654 | likely_pathogenic | 0.8456 | pathogenic | -2.042 | Highly Destabilizing | 0.998 | D | 0.621 | neutral | None | None | None | None | N |
L/C | 0.9083 | likely_pathogenic | 0.881 | pathogenic | -1.169 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
L/D | 0.9934 | likely_pathogenic | 0.9932 | pathogenic | -2.156 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
L/E | 0.9349 | likely_pathogenic | 0.9315 | pathogenic | -1.917 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
L/F | 0.5111 | ambiguous | 0.4829 | ambiguous | -1.271 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | N | 0.50736648 | None | None | N |
L/G | 0.9744 | likely_pathogenic | 0.9723 | pathogenic | -2.54 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/H | 0.87 | likely_pathogenic | 0.8665 | pathogenic | -1.872 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
L/I | 0.142 | likely_benign | 0.1287 | benign | -0.602 | Destabilizing | 0.91 | D | 0.366 | neutral | None | None | None | None | N |
L/K | 0.9011 | likely_pathogenic | 0.8922 | pathogenic | -1.388 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
L/M | 0.2833 | likely_benign | 0.2578 | benign | -0.539 | Destabilizing | 0.999 | D | 0.767 | deleterious | N | 0.502175467 | None | None | N |
L/N | 0.9705 | likely_pathogenic | 0.9697 | pathogenic | -1.82 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
L/P | 0.9659 | likely_pathogenic | 0.968 | pathogenic | -1.065 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
L/Q | 0.7545 | likely_pathogenic | 0.7387 | pathogenic | -1.629 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
L/R | 0.8246 | likely_pathogenic | 0.8012 | pathogenic | -1.302 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/S | 0.9592 | likely_pathogenic | 0.9543 | pathogenic | -2.468 | Highly Destabilizing | 1.0 | D | 0.806 | deleterious | D | 0.536093025 | None | None | N |
L/T | 0.8965 | likely_pathogenic | 0.8826 | pathogenic | -2.074 | Highly Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
L/V | 0.1988 | likely_benign | 0.164 | benign | -1.065 | Destabilizing | 0.981 | D | 0.526 | neutral | N | 0.499816549 | None | None | N |
L/W | 0.8101 | likely_pathogenic | 0.7895 | pathogenic | -1.554 | Destabilizing | 1.0 | D | 0.805 | deleterious | D | 0.543854933 | None | None | N |
L/Y | 0.875 | likely_pathogenic | 0.8675 | pathogenic | -1.216 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.