Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6996 | 21211;21212;21213 | chr2:178724389;178724388;178724387 | chr2:179589116;179589115;179589114 |
N2AB | 6679 | 20260;20261;20262 | chr2:178724389;178724388;178724387 | chr2:179589116;179589115;179589114 |
N2A | 5752 | 17479;17480;17481 | chr2:178724389;178724388;178724387 | chr2:179589116;179589115;179589114 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/C | rs2078977093 | None | 0.975 | N | 0.535 | 0.441 | 0.807077759815 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
F/L | rs753725329 | -0.75 | 0.065 | N | 0.166 | 0.154 | 0.199424873507 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
F/L | rs753725329 | -0.75 | 0.065 | N | 0.166 | 0.154 | 0.199424873507 | gnomAD-4.0.0 | 3.18377E-06 | None | None | None | None | N | None | 0 | 2.28739E-05 | None | 0 | 0 | None | 0 | 0 | 2.85946E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.531 | ambiguous | 0.5748 | pathogenic | -2.218 | Highly Destabilizing | 0.3 | N | 0.311 | neutral | None | None | None | None | N |
F/C | 0.2844 | likely_benign | 0.3077 | benign | -1.474 | Destabilizing | 0.975 | D | 0.535 | neutral | N | 0.4854922 | None | None | N |
F/D | 0.7914 | likely_pathogenic | 0.842 | pathogenic | -0.868 | Destabilizing | 0.936 | D | 0.623 | neutral | None | None | None | None | N |
F/E | 0.7686 | likely_pathogenic | 0.8193 | pathogenic | -0.714 | Destabilizing | 0.936 | D | 0.584 | neutral | None | None | None | None | N |
F/G | 0.7758 | likely_pathogenic | 0.8019 | pathogenic | -2.61 | Highly Destabilizing | 0.936 | D | 0.529 | neutral | None | None | None | None | N |
F/H | 0.601 | likely_pathogenic | 0.6213 | pathogenic | -0.926 | Destabilizing | 0.981 | D | 0.517 | neutral | None | None | None | None | N |
F/I | 0.0721 | likely_benign | 0.0837 | benign | -1.007 | Destabilizing | 0.001 | N | 0.065 | neutral | N | 0.375460399 | None | None | N |
F/K | 0.7431 | likely_pathogenic | 0.8017 | pathogenic | -1.364 | Destabilizing | 0.828 | D | 0.583 | neutral | None | None | None | None | N |
F/L | 0.6642 | likely_pathogenic | 0.6681 | pathogenic | -1.007 | Destabilizing | 0.065 | N | 0.166 | neutral | N | 0.419867324 | None | None | N |
F/M | 0.3011 | likely_benign | 0.3468 | ambiguous | -0.862 | Destabilizing | 0.893 | D | 0.468 | neutral | None | None | None | None | N |
F/N | 0.5727 | likely_pathogenic | 0.6262 | pathogenic | -1.546 | Destabilizing | 0.981 | D | 0.597 | neutral | None | None | None | None | N |
F/P | 0.93 | likely_pathogenic | 0.9349 | pathogenic | -1.409 | Destabilizing | 0.981 | D | 0.602 | neutral | None | None | None | None | N |
F/Q | 0.675 | likely_pathogenic | 0.7319 | pathogenic | -1.491 | Destabilizing | 0.981 | D | 0.547 | neutral | None | None | None | None | N |
F/R | 0.6502 | likely_pathogenic | 0.705 | pathogenic | -0.889 | Destabilizing | 0.981 | D | 0.58 | neutral | None | None | None | None | N |
F/S | 0.4527 | ambiguous | 0.4924 | ambiguous | -2.446 | Highly Destabilizing | 0.784 | D | 0.495 | neutral | N | 0.468624064 | None | None | N |
F/T | 0.4534 | ambiguous | 0.496 | ambiguous | -2.185 | Highly Destabilizing | 0.495 | N | 0.393 | neutral | None | None | None | None | N |
F/V | 0.1176 | likely_benign | 0.1272 | benign | -1.409 | Destabilizing | 0.003 | N | 0.185 | neutral | N | 0.411898415 | None | None | N |
F/W | 0.4788 | ambiguous | 0.4906 | ambiguous | -0.117 | Destabilizing | 0.995 | D | 0.46 | neutral | None | None | None | None | N |
F/Y | 0.1291 | likely_benign | 0.1283 | benign | -0.411 | Destabilizing | 0.917 | D | 0.38 | neutral | N | 0.460100581 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.