Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6997 | 21214;21215;21216 | chr2:178724386;178724385;178724384 | chr2:179589113;179589112;179589111 |
N2AB | 6680 | 20263;20264;20265 | chr2:178724386;178724385;178724384 | chr2:179589113;179589112;179589111 |
N2A | 5753 | 17482;17483;17484 | chr2:178724386;178724385;178724384 | chr2:179589113;179589112;179589111 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/I | rs1003049715 | 0.477 | 0.473 | N | 0.54 | 0.226 | 0.524533156562 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
S/I | rs1003049715 | 0.477 | 0.473 | N | 0.54 | 0.226 | 0.524533156562 | gnomAD-4.0.0 | 7.95938E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.38696E-04 | None | 0 | 0 | 0 | 0 | 0 |
S/N | None | None | 0.642 | N | 0.361 | 0.185 | 0.170165803431 | gnomAD-4.0.0 | 4.77563E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85946E-06 | 1.43299E-05 | 3.02627E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1214 | likely_benign | 0.1225 | benign | -0.536 | Destabilizing | 0.176 | N | 0.276 | neutral | None | None | None | None | N |
S/C | 0.2259 | likely_benign | 0.2566 | benign | -0.325 | Destabilizing | 0.993 | D | 0.465 | neutral | N | 0.486848553 | None | None | N |
S/D | 0.6839 | likely_pathogenic | 0.6854 | pathogenic | 0.414 | Stabilizing | 0.704 | D | 0.332 | neutral | None | None | None | None | N |
S/E | 0.7873 | likely_pathogenic | 0.8008 | pathogenic | 0.354 | Stabilizing | 0.329 | N | 0.33 | neutral | None | None | None | None | N |
S/F | 0.269 | likely_benign | 0.2753 | benign | -0.967 | Destabilizing | 0.893 | D | 0.541 | neutral | None | None | None | None | N |
S/G | 0.1762 | likely_benign | 0.1714 | benign | -0.699 | Destabilizing | 0.425 | N | 0.331 | neutral | N | 0.482862797 | None | None | N |
S/H | 0.4924 | ambiguous | 0.5133 | ambiguous | -1.129 | Destabilizing | 0.017 | N | 0.295 | neutral | None | None | None | None | N |
S/I | 0.2277 | likely_benign | 0.2283 | benign | -0.23 | Destabilizing | 0.473 | N | 0.54 | neutral | N | 0.468490778 | None | None | N |
S/K | 0.8964 | likely_pathogenic | 0.9066 | pathogenic | -0.436 | Destabilizing | 0.329 | N | 0.323 | neutral | None | None | None | None | N |
S/L | 0.1361 | likely_benign | 0.1365 | benign | -0.23 | Destabilizing | 0.007 | N | 0.344 | neutral | None | None | None | None | N |
S/M | 0.2945 | likely_benign | 0.3087 | benign | -0.036 | Destabilizing | 0.893 | D | 0.5 | neutral | None | None | None | None | N |
S/N | 0.2942 | likely_benign | 0.2891 | benign | -0.213 | Destabilizing | 0.642 | D | 0.361 | neutral | N | 0.477763622 | None | None | N |
S/P | 0.8695 | likely_pathogenic | 0.865 | pathogenic | -0.301 | Destabilizing | 0.828 | D | 0.521 | neutral | None | None | None | None | N |
S/Q | 0.702 | likely_pathogenic | 0.7299 | pathogenic | -0.401 | Destabilizing | 0.085 | N | 0.241 | neutral | None | None | None | None | N |
S/R | 0.8042 | likely_pathogenic | 0.8278 | pathogenic | -0.287 | Destabilizing | 0.006 | N | 0.314 | neutral | N | 0.45794571 | None | None | N |
S/T | 0.0953 | likely_benign | 0.0973 | benign | -0.341 | Destabilizing | 0.01 | N | 0.12 | neutral | N | 0.422350269 | None | None | N |
S/V | 0.249 | likely_benign | 0.2475 | benign | -0.301 | Destabilizing | 0.543 | D | 0.495 | neutral | None | None | None | None | N |
S/W | 0.4794 | ambiguous | 0.5081 | ambiguous | -0.937 | Destabilizing | 0.995 | D | 0.576 | neutral | None | None | None | None | N |
S/Y | 0.2664 | likely_benign | 0.2791 | benign | -0.67 | Destabilizing | 0.893 | D | 0.552 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.