Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6998 | 21217;21218;21219 | chr2:178724383;178724382;178724381 | chr2:179589110;179589109;179589108 |
N2AB | 6681 | 20266;20267;20268 | chr2:178724383;178724382;178724381 | chr2:179589110;179589109;179589108 |
N2A | 5754 | 17485;17486;17487 | chr2:178724383;178724382;178724381 | chr2:179589110;179589109;179589108 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/I | rs2078975916 | None | 0.669 | N | 0.595 | 0.229 | 0.269558022972 | gnomAD-4.0.0 | 4.10594E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69879E-06 | 3.47834E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.8264 | likely_pathogenic | 0.8454 | pathogenic | -1.772 | Destabilizing | 0.525 | D | 0.633 | neutral | None | None | None | None | N |
F/C | 0.6521 | likely_pathogenic | 0.6942 | pathogenic | -1.237 | Destabilizing | 0.997 | D | 0.677 | prob.neutral | N | 0.485630331 | None | None | N |
F/D | 0.9345 | likely_pathogenic | 0.9337 | pathogenic | 0.155 | Stabilizing | 0.842 | D | 0.713 | prob.delet. | None | None | None | None | N |
F/E | 0.9497 | likely_pathogenic | 0.9493 | pathogenic | 0.243 | Stabilizing | 0.842 | D | 0.713 | prob.delet. | None | None | None | None | N |
F/G | 0.9284 | likely_pathogenic | 0.9337 | pathogenic | -2.081 | Highly Destabilizing | 0.007 | N | 0.505 | neutral | None | None | None | None | N |
F/H | 0.7833 | likely_pathogenic | 0.7864 | pathogenic | -0.311 | Destabilizing | 0.998 | D | 0.632 | neutral | None | None | None | None | N |
F/I | 0.3407 | ambiguous | 0.3468 | ambiguous | -0.869 | Destabilizing | 0.669 | D | 0.595 | neutral | N | 0.490730132 | None | None | N |
F/K | 0.9511 | likely_pathogenic | 0.9483 | pathogenic | -1.033 | Destabilizing | 0.842 | D | 0.714 | prob.delet. | None | None | None | None | N |
F/L | 0.9055 | likely_pathogenic | 0.9041 | pathogenic | -0.869 | Destabilizing | 0.012 | N | 0.277 | neutral | N | 0.471701654 | None | None | N |
F/M | 0.6959 | likely_pathogenic | 0.7084 | pathogenic | -0.834 | Destabilizing | 0.949 | D | 0.631 | neutral | None | None | None | None | N |
F/N | 0.8252 | likely_pathogenic | 0.8156 | pathogenic | -1.179 | Destabilizing | 0.949 | D | 0.719 | prob.delet. | None | None | None | None | N |
F/P | 0.9955 | likely_pathogenic | 0.995 | pathogenic | -1.16 | Destabilizing | 0.974 | D | 0.717 | prob.delet. | None | None | None | None | N |
F/Q | 0.9073 | likely_pathogenic | 0.9082 | pathogenic | -1.128 | Destabilizing | 0.974 | D | 0.715 | prob.delet. | None | None | None | None | N |
F/R | 0.8812 | likely_pathogenic | 0.8793 | pathogenic | -0.513 | Destabilizing | 0.974 | D | 0.723 | prob.delet. | None | None | None | None | N |
F/S | 0.6617 | likely_pathogenic | 0.6805 | pathogenic | -2.039 | Highly Destabilizing | 0.062 | N | 0.464 | neutral | N | 0.460945943 | None | None | N |
F/T | 0.7168 | likely_pathogenic | 0.7264 | pathogenic | -1.853 | Destabilizing | 0.728 | D | 0.671 | neutral | None | None | None | None | N |
F/V | 0.328 | likely_benign | 0.3461 | ambiguous | -1.16 | Destabilizing | 0.669 | D | 0.607 | neutral | N | 0.462060664 | None | None | N |
F/W | 0.7485 | likely_pathogenic | 0.7556 | pathogenic | -0.01 | Destabilizing | 0.998 | D | 0.624 | neutral | None | None | None | None | N |
F/Y | 0.2892 | likely_benign | 0.2834 | benign | -0.266 | Destabilizing | 0.961 | D | 0.595 | neutral | N | 0.48033978 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.