Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 6999 | 21220;21221;21222 | chr2:178724380;178724379;178724378 | chr2:179589107;179589106;179589105 |
N2AB | 6682 | 20269;20270;20271 | chr2:178724380;178724379;178724378 | chr2:179589107;179589106;179589105 |
N2A | 5755 | 17488;17489;17490 | chr2:178724380;178724379;178724378 | chr2:179589107;179589106;179589105 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | rs1343770232 | -0.286 | 0.56 | D | 0.215 | 0.236 | 0.442466506703 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
Y/C | rs1343770232 | -0.286 | 0.56 | D | 0.215 | 0.236 | 0.442466506703 | gnomAD-4.0.0 | 6.84326E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73671E-04 | 8.09636E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.266 | likely_benign | 0.2671 | benign | -0.492 | Destabilizing | 0.007 | N | 0.283 | neutral | None | None | None | None | N |
Y/C | 0.0876 | likely_benign | 0.0918 | benign | 0.033 | Stabilizing | 0.56 | D | 0.215 | neutral | D | 0.526381501 | None | None | N |
Y/D | 0.16 | likely_benign | 0.1664 | benign | 0.823 | Stabilizing | 0.029 | N | 0.307 | neutral | N | 0.409284971 | None | None | N |
Y/E | 0.3873 | ambiguous | 0.3863 | ambiguous | 0.806 | Stabilizing | 0.001 | N | 0.208 | neutral | None | None | None | None | N |
Y/F | 0.0765 | likely_benign | 0.0794 | benign | -0.221 | Destabilizing | None | N | 0.173 | neutral | N | 0.456982918 | None | None | N |
Y/G | 0.2724 | likely_benign | 0.2738 | benign | -0.654 | Destabilizing | 0.031 | N | 0.276 | neutral | None | None | None | None | N |
Y/H | 0.0952 | likely_benign | 0.0959 | benign | 0.319 | Stabilizing | None | N | 0.144 | neutral | N | 0.446573923 | None | None | N |
Y/I | 0.1948 | likely_benign | 0.2023 | benign | -0.095 | Destabilizing | 0.016 | N | 0.25 | neutral | None | None | None | None | N |
Y/K | 0.3488 | ambiguous | 0.3517 | ambiguous | 0.163 | Stabilizing | 0.072 | N | 0.298 | neutral | None | None | None | None | N |
Y/L | 0.2222 | likely_benign | 0.2189 | benign | -0.095 | Destabilizing | None | N | 0.139 | neutral | None | None | None | None | N |
Y/M | 0.3759 | ambiguous | 0.3935 | ambiguous | -0.144 | Destabilizing | 0.214 | N | 0.221 | neutral | None | None | None | None | N |
Y/N | 0.1018 | likely_benign | 0.1049 | benign | -0.131 | Destabilizing | 0.055 | N | 0.311 | neutral | N | 0.436663574 | None | None | N |
Y/P | 0.7688 | likely_pathogenic | 0.7393 | pathogenic | -0.209 | Destabilizing | 0.136 | N | 0.319 | neutral | None | None | None | None | N |
Y/Q | 0.2181 | likely_benign | 0.2151 | benign | -0.032 | Destabilizing | 0.072 | N | 0.303 | neutral | None | None | None | None | N |
Y/R | 0.2165 | likely_benign | 0.2143 | benign | 0.322 | Stabilizing | 0.072 | N | 0.337 | neutral | None | None | None | None | N |
Y/S | 0.0942 | likely_benign | 0.1011 | benign | -0.478 | Destabilizing | 0.002 | N | 0.21 | neutral | N | 0.415749584 | None | None | N |
Y/T | 0.2042 | likely_benign | 0.2191 | benign | -0.409 | Destabilizing | None | N | 0.146 | neutral | None | None | None | None | N |
Y/V | 0.1695 | likely_benign | 0.1735 | benign | -0.209 | Destabilizing | None | N | 0.158 | neutral | None | None | None | None | N |
Y/W | 0.3225 | likely_benign | 0.3235 | benign | -0.406 | Destabilizing | 0.356 | N | 0.295 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.