Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7000 | 21223;21224;21225 | chr2:178724377;178724376;178724375 | chr2:179589104;179589103;179589102 |
N2AB | 6683 | 20272;20273;20274 | chr2:178724377;178724376;178724375 | chr2:179589104;179589103;179589102 |
N2A | 5756 | 17491;17492;17493 | chr2:178724377;178724376;178724375 | chr2:179589104;179589103;179589102 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs1173819966 | None | 0.015 | N | 0.098 | 0.104 | 0.0716867268079 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/D | rs1173819966 | None | 0.015 | N | 0.098 | 0.104 | 0.0716867268079 | gnomAD-4.0.0 | 2.56303E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78801E-06 | 0 | 0 |
N/I | rs764035021 | 0.299 | 0.996 | N | 0.45 | 0.421 | 0.463243292966 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
N/I | rs764035021 | 0.299 | 0.996 | N | 0.45 | 0.421 | 0.463243292966 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/I | rs764035021 | 0.299 | 0.996 | N | 0.45 | 0.421 | 0.463243292966 | gnomAD-4.0.0 | 1.85939E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54322E-06 | 0 | 0 |
N/S | rs764035021 | -0.305 | 0.826 | N | 0.355 | 0.209 | 0.0806252709748 | gnomAD-2.1.1 | 9.25E-05 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 7.19095E-04 | None | 0 | 0 | 0 |
N/S | rs764035021 | -0.305 | 0.826 | N | 0.355 | 0.209 | 0.0806252709748 | gnomAD-3.1.2 | 6.57E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07125E-03 | 0 |
N/S | rs764035021 | -0.305 | 0.826 | N | 0.355 | 0.209 | 0.0806252709748 | gnomAD-4.0.0 | 6.136E-05 | None | None | None | None | N | None | 0 | 1.66783E-05 | None | 0 | 0 | None | 0 | 0 | 4.2387E-06 | 9.55267E-04 | 9.61015E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.4651 | ambiguous | 0.474 | ambiguous | -0.118 | Destabilizing | 0.939 | D | 0.377 | neutral | None | None | None | None | N |
N/C | 0.5569 | ambiguous | 0.5679 | pathogenic | -0.01 | Destabilizing | 0.999 | D | 0.472 | neutral | None | None | None | None | N |
N/D | 0.1327 | likely_benign | 0.1501 | benign | 0.27 | Stabilizing | 0.015 | N | 0.098 | neutral | N | 0.429520518 | None | None | N |
N/E | 0.4243 | ambiguous | 0.454 | ambiguous | 0.239 | Stabilizing | 0.759 | D | 0.321 | neutral | None | None | None | None | N |
N/F | 0.8595 | likely_pathogenic | 0.8694 | pathogenic | -0.713 | Destabilizing | 0.997 | D | 0.443 | neutral | None | None | None | None | N |
N/G | 0.2727 | likely_benign | 0.2835 | benign | -0.232 | Destabilizing | 0.927 | D | 0.325 | neutral | None | None | None | None | N |
N/H | 0.1073 | likely_benign | 0.1132 | benign | -0.134 | Destabilizing | 0.996 | D | 0.427 | neutral | N | 0.470639209 | None | None | N |
N/I | 0.782 | likely_pathogenic | 0.7765 | pathogenic | 0.085 | Stabilizing | 0.996 | D | 0.45 | neutral | N | 0.494689504 | None | None | N |
N/K | 0.3187 | likely_benign | 0.3203 | benign | 0.154 | Stabilizing | 0.134 | N | 0.125 | neutral | N | 0.448858427 | None | None | N |
N/L | 0.5518 | ambiguous | 0.5518 | ambiguous | 0.085 | Stabilizing | 0.991 | D | 0.413 | neutral | None | None | None | None | N |
N/M | 0.6969 | likely_pathogenic | 0.6962 | pathogenic | -0.101 | Destabilizing | 0.999 | D | 0.435 | neutral | None | None | None | None | N |
N/P | 0.8635 | likely_pathogenic | 0.8261 | pathogenic | 0.041 | Stabilizing | 0.997 | D | 0.431 | neutral | None | None | None | None | N |
N/Q | 0.2986 | likely_benign | 0.3067 | benign | -0.254 | Destabilizing | 0.982 | D | 0.361 | neutral | None | None | None | None | N |
N/R | 0.3127 | likely_benign | 0.3129 | benign | 0.245 | Stabilizing | 0.884 | D | 0.352 | neutral | None | None | None | None | N |
N/S | 0.1154 | likely_benign | 0.1087 | benign | -0.129 | Destabilizing | 0.826 | D | 0.355 | neutral | N | 0.419978315 | None | None | N |
N/T | 0.4137 | ambiguous | 0.417 | ambiguous | -0.033 | Destabilizing | 0.959 | D | 0.287 | neutral | N | 0.459518138 | None | None | N |
N/V | 0.7499 | likely_pathogenic | 0.7418 | pathogenic | 0.041 | Stabilizing | 0.991 | D | 0.422 | neutral | None | None | None | None | N |
N/W | 0.8636 | likely_pathogenic | 0.8756 | pathogenic | -0.858 | Destabilizing | 0.999 | D | 0.58 | neutral | None | None | None | None | N |
N/Y | 0.3185 | likely_benign | 0.3364 | benign | -0.506 | Destabilizing | 0.996 | D | 0.429 | neutral | N | 0.500615399 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.