Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7001 | 21226;21227;21228 | chr2:178724374;178724373;178724372 | chr2:179589101;179589100;179589099 |
N2AB | 6684 | 20275;20276;20277 | chr2:178724374;178724373;178724372 | chr2:179589101;179589100;179589099 |
N2A | 5757 | 17494;17495;17496 | chr2:178724374;178724373;178724372 | chr2:179589101;179589100;179589099 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs200594798 | -0.198 | 0.642 | N | 0.336 | 0.108 | None | gnomAD-2.1.1 | 2.46363E-04 | None | None | None | None | N | None | 2.77043E-03 | 5.66E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/R | rs200594798 | -0.198 | 0.642 | N | 0.336 | 0.108 | None | gnomAD-3.1.2 | 6.44152E-04 | None | None | None | None | N | None | 2.31649E-03 | 1.31044E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs200594798 | -0.198 | 0.642 | N | 0.336 | 0.108 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 8E-04 | 0 | None | None | 0 | 0 | None | None | None | 0 | None |
K/R | rs200594798 | -0.198 | 0.642 | N | 0.336 | 0.108 | None | gnomAD-4.0.0 | 1.33867E-04 | None | None | None | None | N | None | 2.69312E-03 | 1.16709E-04 | None | 0 | 0 | None | 0 | 0 | 8.47744E-07 | 0 | 9.60707E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4382 | ambiguous | 0.4779 | ambiguous | -0.59 | Destabilizing | 0.329 | N | 0.403 | neutral | None | None | None | None | N |
K/C | 0.7414 | likely_pathogenic | 0.7768 | pathogenic | -0.686 | Destabilizing | 0.995 | D | 0.506 | neutral | None | None | None | None | N |
K/D | 0.4369 | ambiguous | 0.4756 | ambiguous | 0.014 | Stabilizing | 0.543 | D | 0.391 | neutral | None | None | None | None | N |
K/E | 0.1877 | likely_benign | 0.2161 | benign | 0.167 | Stabilizing | 0.425 | N | 0.337 | neutral | N | 0.437319722 | None | None | N |
K/F | 0.8275 | likely_pathogenic | 0.8508 | pathogenic | -0.226 | Destabilizing | 0.893 | D | 0.539 | neutral | None | None | None | None | N |
K/G | 0.3055 | likely_benign | 0.3282 | benign | -0.962 | Destabilizing | 0.329 | N | 0.457 | neutral | None | None | None | None | N |
K/H | 0.2633 | likely_benign | 0.2816 | benign | -1.049 | Destabilizing | 0.944 | D | 0.489 | neutral | None | None | None | None | N |
K/I | 0.6571 | likely_pathogenic | 0.6854 | pathogenic | 0.382 | Stabilizing | 0.473 | N | 0.527 | neutral | N | 0.485999103 | None | None | N |
K/L | 0.486 | ambiguous | 0.5176 | ambiguous | 0.382 | Stabilizing | 0.329 | N | 0.457 | neutral | None | None | None | None | N |
K/M | 0.2708 | likely_benign | 0.2926 | benign | -0.007 | Destabilizing | 0.176 | N | 0.313 | neutral | None | None | None | None | N |
K/N | 0.2538 | likely_benign | 0.2703 | benign | -0.546 | Destabilizing | 0.002 | N | 0.142 | neutral | N | 0.432375262 | None | None | N |
K/P | 0.8892 | likely_pathogenic | 0.9188 | pathogenic | 0.087 | Stabilizing | 0.944 | D | 0.495 | neutral | None | None | None | None | N |
K/Q | 0.1156 | likely_benign | 0.1249 | benign | -0.464 | Destabilizing | 0.784 | D | 0.44 | neutral | N | 0.435050208 | None | None | N |
K/R | 0.0827 | likely_benign | 0.0867 | benign | -0.414 | Destabilizing | 0.642 | D | 0.336 | neutral | N | 0.43853323 | None | None | N |
K/S | 0.3644 | ambiguous | 0.4045 | ambiguous | -1.186 | Destabilizing | 0.085 | N | 0.141 | neutral | None | None | None | None | N |
K/T | 0.2337 | likely_benign | 0.2734 | benign | -0.811 | Destabilizing | 0.023 | N | 0.205 | neutral | N | 0.446883354 | None | None | N |
K/V | 0.5893 | likely_pathogenic | 0.6252 | pathogenic | 0.087 | Stabilizing | 0.543 | D | 0.448 | neutral | None | None | None | None | N |
K/W | 0.7864 | likely_pathogenic | 0.8265 | pathogenic | -0.159 | Destabilizing | 0.995 | D | 0.547 | neutral | None | None | None | None | N |
K/Y | 0.5838 | likely_pathogenic | 0.6232 | pathogenic | 0.14 | Stabilizing | 0.981 | D | 0.519 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.