Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7003 | 21232;21233;21234 | chr2:178724368;178724367;178724366 | chr2:179589095;179589094;179589093 |
N2AB | 6686 | 20281;20282;20283 | chr2:178724368;178724367;178724366 | chr2:179589095;179589094;179589093 |
N2A | 5759 | 17500;17501;17502 | chr2:178724368;178724367;178724366 | chr2:179589095;179589094;179589093 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.02 | N | 0.433 | 0.092 | 0.0666544352282 | gnomAD-4.0.0 | 1.36862E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79915E-06 | 0 | 0 |
S/P | None | None | 0.991 | N | 0.782 | 0.255 | 0.173771789658 | gnomAD-4.0.0 | 6.84311E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99577E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0659 | likely_benign | 0.0684 | benign | -0.62 | Destabilizing | 0.02 | N | 0.433 | neutral | N | 0.378998484 | None | None | N |
S/C | 0.148 | likely_benign | 0.1365 | benign | -0.049 | Destabilizing | 0.999 | D | 0.763 | deleterious | N | 0.44349268 | None | None | N |
S/D | 0.983 | likely_pathogenic | 0.9774 | pathogenic | -0.938 | Destabilizing | 0.993 | D | 0.686 | prob.neutral | None | None | None | None | N |
S/E | 0.9873 | likely_pathogenic | 0.9831 | pathogenic | -0.686 | Destabilizing | 0.953 | D | 0.686 | prob.neutral | None | None | None | None | N |
S/F | 0.7417 | likely_pathogenic | 0.6615 | pathogenic | -0.566 | Destabilizing | 0.997 | D | 0.8 | deleterious | N | 0.470561851 | None | None | N |
S/G | 0.2282 | likely_benign | 0.1914 | benign | -1.046 | Destabilizing | 0.807 | D | 0.679 | prob.neutral | None | None | None | None | N |
S/H | 0.9285 | likely_pathogenic | 0.8944 | pathogenic | -1.258 | Destabilizing | 0.999 | D | 0.766 | deleterious | None | None | None | None | N |
S/I | 0.6354 | likely_pathogenic | 0.5876 | pathogenic | 0.492 | Stabilizing | 0.986 | D | 0.795 | deleterious | None | None | None | None | N |
S/K | 0.9967 | likely_pathogenic | 0.9949 | pathogenic | 0.749 | Stabilizing | 0.953 | D | 0.674 | neutral | None | None | None | None | N |
S/L | 0.3774 | ambiguous | 0.3324 | benign | 0.492 | Stabilizing | 0.953 | D | 0.761 | deleterious | None | None | None | None | N |
S/M | 0.6386 | likely_pathogenic | 0.5985 | pathogenic | 0.281 | Stabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
S/N | 0.8514 | likely_pathogenic | 0.7877 | pathogenic | -0.117 | Destabilizing | 0.993 | D | 0.713 | prob.delet. | None | None | None | None | N |
S/P | 0.9458 | likely_pathogenic | 0.9316 | pathogenic | 0.154 | Stabilizing | 0.991 | D | 0.782 | deleterious | N | 0.472122076 | None | None | N |
S/Q | 0.9681 | likely_pathogenic | 0.9569 | pathogenic | 0.228 | Stabilizing | 0.993 | D | 0.754 | deleterious | None | None | None | None | N |
S/R | 0.991 | likely_pathogenic | 0.9859 | pathogenic | 0.097 | Stabilizing | 0.993 | D | 0.795 | deleterious | None | None | None | None | N |
S/T | 0.2237 | likely_benign | 0.2135 | benign | 0.208 | Stabilizing | 0.939 | D | 0.67 | neutral | N | 0.45449632 | None | None | N |
S/V | 0.4855 | ambiguous | 0.462 | ambiguous | 0.154 | Stabilizing | 0.91 | D | 0.753 | deleterious | None | None | None | None | N |
S/W | 0.9089 | likely_pathogenic | 0.8642 | pathogenic | -0.805 | Destabilizing | 0.999 | D | 0.782 | deleterious | None | None | None | None | N |
S/Y | 0.7433 | likely_pathogenic | 0.654 | pathogenic | -0.292 | Destabilizing | 0.997 | D | 0.795 | deleterious | N | 0.456093831 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.