Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7005 | 21238;21239;21240 | chr2:178724362;178724361;178724360 | chr2:179589089;179589088;179589087 |
N2AB | 6688 | 20287;20288;20289 | chr2:178724362;178724361;178724360 | chr2:179589089;179589088;179589087 |
N2A | 5761 | 17506;17507;17508 | chr2:178724362;178724361;178724360 | chr2:179589089;179589088;179589087 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.982 | N | 0.691 | 0.533 | 0.605722390383 | gnomAD-4.0.0 | 1.59181E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77362E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9149 | likely_pathogenic | 0.9177 | pathogenic | -2.415 | Highly Destabilizing | 0.953 | D | 0.717 | prob.delet. | None | None | None | None | N |
L/C | 0.8834 | likely_pathogenic | 0.8785 | pathogenic | -1.559 | Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | N |
L/D | 0.9991 | likely_pathogenic | 0.9993 | pathogenic | -3.097 | Highly Destabilizing | 0.998 | D | 0.881 | deleterious | None | None | None | None | N |
L/E | 0.9918 | likely_pathogenic | 0.9942 | pathogenic | -2.767 | Highly Destabilizing | 0.998 | D | 0.874 | deleterious | None | None | None | None | N |
L/F | 0.4327 | ambiguous | 0.4636 | ambiguous | -1.472 | Destabilizing | 0.982 | D | 0.691 | prob.neutral | N | 0.521698527 | None | None | N |
L/G | 0.982 | likely_pathogenic | 0.9844 | pathogenic | -3.016 | Highly Destabilizing | 0.998 | D | 0.872 | deleterious | None | None | None | None | N |
L/H | 0.9681 | likely_pathogenic | 0.9747 | pathogenic | -2.961 | Highly Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
L/I | 0.2027 | likely_benign | 0.2135 | benign | -0.593 | Destabilizing | 0.046 | N | 0.409 | neutral | N | 0.515088708 | None | None | N |
L/K | 0.9834 | likely_pathogenic | 0.9886 | pathogenic | -1.675 | Destabilizing | 0.993 | D | 0.849 | deleterious | None | None | None | None | N |
L/M | 0.2998 | likely_benign | 0.2943 | benign | -0.885 | Destabilizing | 0.986 | D | 0.681 | prob.neutral | None | None | None | None | N |
L/N | 0.9919 | likely_pathogenic | 0.9942 | pathogenic | -2.443 | Highly Destabilizing | 0.998 | D | 0.883 | deleterious | None | None | None | None | N |
L/P | 0.9948 | likely_pathogenic | 0.9959 | pathogenic | -1.194 | Destabilizing | 0.998 | D | 0.882 | deleterious | None | None | None | None | N |
L/Q | 0.9517 | likely_pathogenic | 0.962 | pathogenic | -2.016 | Highly Destabilizing | 0.998 | D | 0.863 | deleterious | None | None | None | None | N |
L/R | 0.9623 | likely_pathogenic | 0.971 | pathogenic | -1.987 | Destabilizing | 0.998 | D | 0.86 | deleterious | None | None | None | None | N |
L/S | 0.9839 | likely_pathogenic | 0.9861 | pathogenic | -2.901 | Highly Destabilizing | 0.991 | D | 0.845 | deleterious | D | 0.568328744 | None | None | N |
L/T | 0.9603 | likely_pathogenic | 0.964 | pathogenic | -2.4 | Highly Destabilizing | 0.986 | D | 0.762 | deleterious | None | None | None | None | N |
L/V | 0.2653 | likely_benign | 0.2534 | benign | -1.194 | Destabilizing | 0.17 | N | 0.415 | neutral | N | 0.512899889 | None | None | N |
L/W | 0.8977 | likely_pathogenic | 0.9191 | pathogenic | -1.845 | Destabilizing | 0.999 | D | 0.809 | deleterious | None | None | None | None | N |
L/Y | 0.9202 | likely_pathogenic | 0.9337 | pathogenic | -1.653 | Destabilizing | 0.998 | D | 0.761 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.