Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7012 | 21259;21260;21261 | chr2:178724341;178724340;178724339 | chr2:179589068;179589067;179589066 |
N2AB | 6695 | 20308;20309;20310 | chr2:178724341;178724340;178724339 | chr2:179589068;179589067;179589066 |
N2A | 5768 | 17527;17528;17529 | chr2:178724341;178724340;178724339 | chr2:179589068;179589067;179589066 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | rs1024577519 | 0.021 | 0.012 | N | 0.298 | 0.067 | 0.0846915920261 | gnomAD-2.1.1 | 2.14E-05 | None | None | None | None | I | None | 2.48057E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
R/S | rs1024577519 | 0.021 | 0.012 | N | 0.298 | 0.067 | 0.0846915920261 | gnomAD-3.1.2 | 5.92E-05 | None | None | None | None | I | None | 2.17108E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
R/S | rs1024577519 | 0.021 | 0.012 | N | 0.298 | 0.067 | 0.0846915920261 | gnomAD-4.0.0 | 1.85937E-05 | None | None | None | None | I | None | 3.33796E-04 | 3.33589E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.80461E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.1693 | likely_benign | 0.1301 | benign | 0.106 | Stabilizing | 0.007 | N | 0.283 | neutral | None | None | None | None | I |
R/C | 0.1963 | likely_benign | 0.1937 | benign | -0.216 | Destabilizing | 0.864 | D | 0.24 | neutral | None | None | None | None | I |
R/D | 0.364 | ambiguous | 0.2734 | benign | -0.245 | Destabilizing | 0.031 | N | 0.317 | neutral | None | None | None | None | I |
R/E | 0.1838 | likely_benign | 0.1327 | benign | -0.18 | Destabilizing | 0.007 | N | 0.259 | neutral | None | None | None | None | I |
R/F | 0.3443 | ambiguous | 0.283 | benign | -0.128 | Destabilizing | 0.214 | N | 0.349 | neutral | None | None | None | None | I |
R/G | 0.1169 | likely_benign | 0.0919 | benign | -0.072 | Destabilizing | 0.024 | N | 0.309 | neutral | N | 0.493862785 | None | None | I |
R/H | 0.1026 | likely_benign | 0.1006 | benign | -0.591 | Destabilizing | 0.214 | N | 0.317 | neutral | None | None | None | None | I |
R/I | 0.1405 | likely_benign | 0.1206 | benign | 0.535 | Stabilizing | None | N | 0.305 | neutral | None | None | None | None | I |
R/K | 0.0674 | likely_benign | 0.0591 | benign | -0.08 | Destabilizing | None | N | 0.171 | neutral | N | 0.37270723 | None | None | I |
R/L | 0.1238 | likely_benign | 0.1037 | benign | 0.535 | Stabilizing | 0.016 | N | 0.277 | neutral | None | None | None | None | I |
R/M | 0.1281 | likely_benign | 0.1026 | benign | -0.031 | Destabilizing | 0.171 | N | 0.305 | neutral | N | 0.467926977 | None | None | I |
R/N | 0.2582 | likely_benign | 0.1903 | benign | -0.026 | Destabilizing | 0.072 | N | 0.321 | neutral | None | None | None | None | I |
R/P | 0.1501 | likely_benign | 0.1225 | benign | 0.412 | Stabilizing | None | N | 0.231 | neutral | None | None | None | None | I |
R/Q | 0.0802 | likely_benign | 0.0726 | benign | -0.04 | Destabilizing | None | N | 0.169 | neutral | None | None | None | None | I |
R/S | 0.2014 | likely_benign | 0.1543 | benign | -0.223 | Destabilizing | 0.012 | N | 0.298 | neutral | N | 0.44208717 | None | None | I |
R/T | 0.1202 | likely_benign | 0.0994 | benign | -0.032 | Destabilizing | 0.024 | N | 0.342 | neutral | N | 0.453130883 | None | None | I |
R/V | 0.1964 | likely_benign | 0.1562 | benign | 0.412 | Stabilizing | 0.016 | N | 0.283 | neutral | None | None | None | None | I |
R/W | 0.1364 | likely_benign | 0.1249 | benign | -0.278 | Destabilizing | 0.828 | D | 0.247 | neutral | N | 0.485320659 | None | None | I |
R/Y | 0.2579 | likely_benign | 0.207 | benign | 0.137 | Stabilizing | 0.356 | N | 0.379 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.