Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7013 | 21262;21263;21264 | chr2:178724338;178724337;178724336 | chr2:179589065;179589064;179589063 |
N2AB | 6696 | 20311;20312;20313 | chr2:178724338;178724337;178724336 | chr2:179589065;179589064;179589063 |
N2A | 5769 | 17530;17531;17532 | chr2:178724338;178724337;178724336 | chr2:179589065;179589064;179589063 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | rs1191869265 | 0.204 | 0.003 | N | 0.131 | 0.097 | 0.0482279557977 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.64E-05 | 0 | 0 |
Q/K | rs1191869265 | 0.204 | 0.003 | N | 0.131 | 0.097 | 0.0482279557977 | gnomAD-4.0.0 | 1.59183E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.88267E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1047 | likely_benign | 0.0955 | benign | -0.161 | Destabilizing | None | N | 0.099 | neutral | None | None | None | None | I |
Q/C | 0.4961 | ambiguous | 0.4287 | ambiguous | 0.191 | Stabilizing | 0.497 | N | 0.32 | neutral | None | None | None | None | I |
Q/D | 0.1573 | likely_benign | 0.1356 | benign | -0.133 | Destabilizing | 0.004 | N | 0.133 | neutral | None | None | None | None | I |
Q/E | 0.058 | likely_benign | 0.0543 | benign | -0.181 | Destabilizing | None | N | 0.081 | neutral | N | 0.367295836 | None | None | I |
Q/F | 0.4993 | ambiguous | 0.4517 | ambiguous | -0.45 | Destabilizing | 0.044 | N | 0.433 | neutral | None | None | None | None | I |
Q/G | 0.1025 | likely_benign | 0.0928 | benign | -0.316 | Destabilizing | None | N | 0.099 | neutral | None | None | None | None | I |
Q/H | 0.1579 | likely_benign | 0.1388 | benign | -0.173 | Destabilizing | 0.196 | N | 0.192 | neutral | N | 0.457285909 | None | None | I |
Q/I | 0.2783 | likely_benign | 0.255 | benign | 0.154 | Stabilizing | 0.009 | N | 0.269 | neutral | None | None | None | None | I |
Q/K | 0.07 | likely_benign | 0.0676 | benign | 0.04 | Stabilizing | 0.003 | N | 0.131 | neutral | N | 0.439545511 | None | None | I |
Q/L | 0.0959 | likely_benign | 0.089 | benign | 0.154 | Stabilizing | None | N | 0.112 | neutral | N | 0.450551938 | None | None | I |
Q/M | 0.2574 | likely_benign | 0.2402 | benign | 0.35 | Stabilizing | 0.138 | N | 0.195 | neutral | None | None | None | None | I |
Q/N | 0.1427 | likely_benign | 0.126 | benign | -0.161 | Destabilizing | None | N | 0.095 | neutral | None | None | None | None | I |
Q/P | 0.0737 | likely_benign | 0.0682 | benign | 0.075 | Stabilizing | 0.028 | N | 0.296 | neutral | N | 0.469137699 | None | None | I |
Q/R | 0.084 | likely_benign | 0.0802 | benign | 0.256 | Stabilizing | None | N | 0.103 | neutral | N | 0.43692928 | None | None | I |
Q/S | 0.108 | likely_benign | 0.1007 | benign | -0.159 | Destabilizing | None | N | 0.07 | neutral | None | None | None | None | I |
Q/T | 0.1137 | likely_benign | 0.1053 | benign | -0.072 | Destabilizing | 0.004 | N | 0.172 | neutral | None | None | None | None | I |
Q/V | 0.1667 | likely_benign | 0.1536 | benign | 0.075 | Stabilizing | None | N | 0.112 | neutral | None | None | None | None | I |
Q/W | 0.3199 | likely_benign | 0.28 | benign | -0.473 | Destabilizing | 0.788 | D | 0.292 | neutral | None | None | None | None | I |
Q/Y | 0.3274 | likely_benign | 0.2923 | benign | -0.208 | Destabilizing | 0.085 | N | 0.337 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.