Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7014 | 21265;21266;21267 | chr2:178724335;178724334;178724333 | chr2:179589062;179589061;179589060 |
N2AB | 6697 | 20314;20315;20316 | chr2:178724335;178724334;178724333 | chr2:179589062;179589061;179589060 |
N2A | 5770 | 17533;17534;17535 | chr2:178724335;178724334;178724333 | chr2:179589062;179589061;179589060 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1256056605 | None | 0.993 | D | 0.789 | 0.639 | 0.664611728801 | gnomAD-4.0.0 | 1.36862E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73611E-04 | 8.99564E-07 | 0 | 0 |
D/V | rs1484212258 | None | 0.997 | D | 0.874 | 0.839 | 0.922917791787 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/V | rs1484212258 | None | 0.997 | D | 0.874 | 0.839 | 0.922917791787 | gnomAD-4.0.0 | 6.57125E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47029E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8821 | likely_pathogenic | 0.8062 | pathogenic | 0.197 | Stabilizing | 0.993 | D | 0.823 | deleterious | D | 0.609047792 | None | None | N |
D/C | 0.974 | likely_pathogenic | 0.9516 | pathogenic | 0.007 | Stabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
D/E | 0.7886 | likely_pathogenic | 0.6853 | pathogenic | -0.939 | Destabilizing | 0.117 | N | 0.345 | neutral | D | 0.596925228 | None | None | N |
D/F | 0.9742 | likely_pathogenic | 0.9578 | pathogenic | 0.741 | Stabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
D/G | 0.8808 | likely_pathogenic | 0.8197 | pathogenic | -0.271 | Destabilizing | 0.977 | D | 0.769 | deleterious | D | 0.630608744 | None | None | N |
D/H | 0.8544 | likely_pathogenic | 0.7677 | pathogenic | 0.167 | Stabilizing | 0.999 | D | 0.825 | deleterious | D | 0.575091032 | None | None | N |
D/I | 0.9699 | likely_pathogenic | 0.9468 | pathogenic | 1.46 | Stabilizing | 0.998 | D | 0.872 | deleterious | None | None | None | None | N |
D/K | 0.9779 | likely_pathogenic | 0.965 | pathogenic | -0.571 | Destabilizing | 0.99 | D | 0.803 | deleterious | None | None | None | None | N |
D/L | 0.9674 | likely_pathogenic | 0.9497 | pathogenic | 1.46 | Stabilizing | 0.995 | D | 0.873 | deleterious | None | None | None | None | N |
D/M | 0.9764 | likely_pathogenic | 0.9592 | pathogenic | 1.917 | Stabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
D/N | 0.6969 | likely_pathogenic | 0.5458 | ambiguous | -1.173 | Destabilizing | 0.993 | D | 0.789 | deleterious | D | 0.58909235 | None | None | N |
D/P | 0.9954 | likely_pathogenic | 0.994 | pathogenic | 1.068 | Stabilizing | 0.998 | D | 0.824 | deleterious | None | None | None | None | N |
D/Q | 0.9354 | likely_pathogenic | 0.8932 | pathogenic | -0.797 | Destabilizing | 0.99 | D | 0.795 | deleterious | None | None | None | None | N |
D/R | 0.9821 | likely_pathogenic | 0.9733 | pathogenic | -0.557 | Destabilizing | 0.995 | D | 0.86 | deleterious | None | None | None | None | N |
D/S | 0.8137 | likely_pathogenic | 0.692 | pathogenic | -1.492 | Destabilizing | 0.983 | D | 0.693 | prob.neutral | None | None | None | None | N |
D/T | 0.9426 | likely_pathogenic | 0.8961 | pathogenic | -1.082 | Destabilizing | 0.995 | D | 0.819 | deleterious | None | None | None | None | N |
D/V | 0.9118 | likely_pathogenic | 0.8605 | pathogenic | 1.068 | Stabilizing | 0.997 | D | 0.874 | deleterious | D | 0.647031714 | None | None | N |
D/W | 0.9935 | likely_pathogenic | 0.9905 | pathogenic | 0.616 | Stabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
D/Y | 0.8333 | likely_pathogenic | 0.7606 | pathogenic | 0.898 | Stabilizing | 1.0 | D | 0.881 | deleterious | D | 0.630810549 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.