Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7023 | 21292;21293;21294 | chr2:178724308;178724307;178724306 | chr2:179589035;179589034;179589033 |
N2AB | 6706 | 20341;20342;20343 | chr2:178724308;178724307;178724306 | chr2:179589035;179589034;179589033 |
N2A | 5779 | 17560;17561;17562 | chr2:178724308;178724307;178724306 | chr2:179589035;179589034;179589033 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/P | rs753621469 | 0.062 | 0.784 | N | 0.479 | 0.389 | 0.440077040801 | gnomAD-2.1.1 | 7.14E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.56E-05 | 0 |
Q/P | rs753621469 | 0.062 | 0.784 | N | 0.479 | 0.389 | 0.440077040801 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
Q/P | rs753621469 | 0.062 | 0.784 | N | 0.479 | 0.389 | 0.440077040801 | gnomAD-4.0.0 | 5.57834E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.62959E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2473 | likely_benign | 0.2805 | benign | -0.346 | Destabilizing | 0.176 | N | 0.371 | neutral | None | None | None | None | I |
Q/C | 0.5558 | ambiguous | 0.5955 | pathogenic | -0.121 | Destabilizing | 0.995 | D | 0.481 | neutral | None | None | None | None | I |
Q/D | 0.4858 | ambiguous | 0.5275 | ambiguous | -1.319 | Destabilizing | 0.003 | N | 0.095 | neutral | None | None | None | None | I |
Q/E | 0.0977 | likely_benign | 0.0995 | benign | -1.239 | Destabilizing | 0.139 | N | 0.225 | neutral | N | 0.410517122 | None | None | I |
Q/F | 0.6327 | likely_pathogenic | 0.6851 | pathogenic | -0.363 | Destabilizing | 0.981 | D | 0.501 | neutral | None | None | None | None | I |
Q/G | 0.2913 | likely_benign | 0.3306 | benign | -0.659 | Destabilizing | 0.495 | N | 0.498 | neutral | None | None | None | None | I |
Q/H | 0.1945 | likely_benign | 0.2146 | benign | -0.804 | Destabilizing | 0.975 | D | 0.434 | neutral | N | 0.462332809 | None | None | I |
Q/I | 0.387 | ambiguous | 0.4137 | ambiguous | 0.431 | Stabilizing | 0.944 | D | 0.517 | neutral | None | None | None | None | I |
Q/K | 0.0889 | likely_benign | 0.0867 | benign | -0.187 | Destabilizing | 0.002 | N | 0.117 | neutral | N | 0.40199364 | None | None | I |
Q/L | 0.1612 | likely_benign | 0.1722 | benign | 0.431 | Stabilizing | 0.642 | D | 0.457 | neutral | N | 0.488593904 | None | None | I |
Q/M | 0.3549 | ambiguous | 0.3734 | ambiguous | 0.868 | Stabilizing | 0.981 | D | 0.448 | neutral | None | None | None | None | I |
Q/N | 0.3406 | ambiguous | 0.3706 | ambiguous | -0.807 | Destabilizing | 0.495 | N | 0.255 | neutral | None | None | None | None | I |
Q/P | 0.812 | likely_pathogenic | 0.8303 | pathogenic | 0.203 | Stabilizing | 0.784 | D | 0.479 | neutral | N | 0.514761785 | None | None | I |
Q/R | 0.0899 | likely_benign | 0.0974 | benign | -0.123 | Destabilizing | 0.473 | N | 0.261 | neutral | N | 0.425102573 | None | None | I |
Q/S | 0.2605 | likely_benign | 0.3087 | benign | -0.797 | Destabilizing | 0.037 | N | 0.093 | neutral | None | None | None | None | I |
Q/T | 0.1883 | likely_benign | 0.2119 | benign | -0.543 | Destabilizing | 0.329 | N | 0.396 | neutral | None | None | None | None | I |
Q/V | 0.269 | likely_benign | 0.2878 | benign | 0.203 | Stabilizing | 0.828 | D | 0.489 | neutral | None | None | None | None | I |
Q/W | 0.4384 | ambiguous | 0.4731 | ambiguous | -0.352 | Destabilizing | 0.995 | D | 0.507 | neutral | None | None | None | None | I |
Q/Y | 0.4402 | ambiguous | 0.4821 | ambiguous | 0.005 | Stabilizing | 0.981 | D | 0.457 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.