Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7025 | 21298;21299;21300 | chr2:178724302;178724301;178724300 | chr2:179589029;179589028;179589027 |
N2AB | 6708 | 20347;20348;20349 | chr2:178724302;178724301;178724300 | chr2:179589029;179589028;179589027 |
N2A | 5781 | 17566;17567;17568 | chr2:178724302;178724301;178724300 | chr2:179589029;179589028;179589027 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs2078960594 | None | 0.166 | N | 0.358 | 0.215 | 0.146414634003 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/S | rs2078960594 | None | 0.166 | N | 0.358 | 0.215 | 0.146414634003 | gnomAD-4.0.0 | 6.57324E-06 | None | None | None | None | I | None | 2.41243E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/Y | None | None | 0.629 | N | 0.295 | 0.299 | 0.521173705876 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1345 | likely_benign | 0.13 | benign | -0.122 | Destabilizing | 0.017 | N | 0.175 | neutral | None | None | None | None | I |
N/C | 0.2984 | likely_benign | 0.3123 | benign | 0.159 | Stabilizing | 0.991 | D | 0.233 | neutral | None | None | None | None | I |
N/D | 0.0845 | likely_benign | 0.0741 | benign | -0.023 | Destabilizing | 0.001 | N | 0.13 | neutral | N | 0.41909932 | None | None | I |
N/E | 0.2073 | likely_benign | 0.1867 | benign | -0.093 | Destabilizing | 0.017 | N | 0.183 | neutral | None | None | None | None | I |
N/F | 0.4715 | ambiguous | 0.4863 | ambiguous | -0.743 | Destabilizing | 0.818 | D | 0.258 | neutral | None | None | None | None | I |
N/G | 0.2141 | likely_benign | 0.2124 | benign | -0.199 | Destabilizing | 0.345 | N | 0.333 | neutral | None | None | None | None | I |
N/H | 0.0929 | likely_benign | 0.0914 | benign | -0.253 | Destabilizing | 0.007 | N | 0.239 | neutral | N | 0.466834552 | None | None | I |
N/I | 0.1652 | likely_benign | 0.1673 | benign | -0.015 | Destabilizing | 0.003 | N | 0.263 | neutral | N | 0.435146208 | None | None | I |
N/K | 0.1717 | likely_benign | 0.1654 | benign | 0.079 | Stabilizing | 0.491 | N | 0.289 | neutral | N | 0.391758003 | None | None | I |
N/L | 0.1859 | likely_benign | 0.1971 | benign | -0.015 | Destabilizing | 0.209 | N | 0.291 | neutral | None | None | None | None | I |
N/M | 0.2715 | likely_benign | 0.2745 | benign | 0.118 | Stabilizing | 0.818 | D | 0.275 | neutral | None | None | None | None | I |
N/P | 0.2964 | likely_benign | 0.2962 | benign | -0.029 | Destabilizing | 0.722 | D | 0.304 | neutral | None | None | None | None | I |
N/Q | 0.2206 | likely_benign | 0.2126 | benign | -0.285 | Destabilizing | 0.561 | D | 0.253 | neutral | None | None | None | None | I |
N/R | 0.185 | likely_benign | 0.1949 | benign | 0.151 | Stabilizing | 0.561 | D | 0.263 | neutral | None | None | None | None | I |
N/S | 0.0691 | likely_benign | 0.0687 | benign | -0.034 | Destabilizing | 0.166 | N | 0.358 | neutral | N | 0.399470623 | None | None | I |
N/T | 0.0961 | likely_benign | 0.0941 | benign | None | Stabilizing | 0.491 | N | 0.287 | neutral | N | 0.429334957 | None | None | I |
N/V | 0.1641 | likely_benign | 0.1643 | benign | -0.029 | Destabilizing | 0.083 | N | 0.294 | neutral | None | None | None | None | I |
N/W | 0.7337 | likely_pathogenic | 0.7345 | pathogenic | -0.881 | Destabilizing | 0.991 | D | 0.269 | neutral | None | None | None | None | I |
N/Y | 0.165 | likely_benign | 0.1738 | benign | -0.56 | Destabilizing | 0.629 | D | 0.295 | neutral | N | 0.496464026 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.