Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7026 | 21301;21302;21303 | chr2:178724299;178724298;178724297 | chr2:179589026;179589025;179589024 |
N2AB | 6709 | 20350;20351;20352 | chr2:178724299;178724298;178724297 | chr2:179589026;179589025;179589024 |
N2A | 5782 | 17569;17570;17571 | chr2:178724299;178724298;178724297 | chr2:179589026;179589025;179589024 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.543 | N | 0.393 | 0.294 | 0.406394481233 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2181 | likely_benign | 0.211 | benign | -0.326 | Destabilizing | 0.543 | D | 0.393 | neutral | N | 0.419907397 | None | None | I |
V/C | 0.8921 | likely_pathogenic | 0.8778 | pathogenic | -0.782 | Destabilizing | 1.0 | D | 0.641 | neutral | None | None | None | None | I |
V/D | 0.8301 | likely_pathogenic | 0.8492 | pathogenic | -0.369 | Destabilizing | 0.998 | D | 0.689 | prob.neutral | D | 0.533099617 | None | None | I |
V/E | 0.6607 | likely_pathogenic | 0.6882 | pathogenic | -0.493 | Destabilizing | 0.999 | D | 0.659 | neutral | None | None | None | None | I |
V/F | 0.3021 | likely_benign | 0.2821 | benign | -0.767 | Destabilizing | 0.999 | D | 0.64 | neutral | N | 0.464565038 | None | None | I |
V/G | 0.5122 | ambiguous | 0.5425 | ambiguous | -0.364 | Destabilizing | 0.997 | D | 0.618 | neutral | N | 0.452425247 | None | None | I |
V/H | 0.8391 | likely_pathogenic | 0.8362 | pathogenic | -0.01 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | I |
V/I | 0.108 | likely_benign | 0.1017 | benign | -0.368 | Destabilizing | 0.987 | D | 0.525 | neutral | N | 0.462044808 | None | None | I |
V/K | 0.7302 | likely_pathogenic | 0.7301 | pathogenic | -0.319 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | I |
V/L | 0.538 | ambiguous | 0.4923 | ambiguous | -0.368 | Destabilizing | 0.973 | D | 0.575 | neutral | N | 0.425892007 | None | None | I |
V/M | 0.346 | ambiguous | 0.298 | benign | -0.523 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
V/N | 0.7034 | likely_pathogenic | 0.7313 | pathogenic | -0.124 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
V/P | 0.9646 | likely_pathogenic | 0.9665 | pathogenic | -0.328 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | I |
V/Q | 0.6758 | likely_pathogenic | 0.6923 | pathogenic | -0.353 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
V/R | 0.5964 | likely_pathogenic | 0.629 | pathogenic | 0.129 | Stabilizing | 0.999 | D | 0.697 | prob.neutral | None | None | None | None | I |
V/S | 0.4472 | ambiguous | 0.4584 | ambiguous | -0.422 | Destabilizing | 0.995 | D | 0.588 | neutral | None | None | None | None | I |
V/T | 0.3068 | likely_benign | 0.2859 | benign | -0.459 | Destabilizing | 0.992 | D | 0.611 | neutral | None | None | None | None | I |
V/W | 0.9428 | likely_pathogenic | 0.9279 | pathogenic | -0.809 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | I |
V/Y | 0.7971 | likely_pathogenic | 0.7896 | pathogenic | -0.535 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.