Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7031 | 21316;21317;21318 | chr2:178724284;178724283;178724282 | chr2:179589011;179589010;179589009 |
N2AB | 6714 | 20365;20366;20367 | chr2:178724284;178724283;178724282 | chr2:179589011;179589010;179589009 |
N2A | 5787 | 17584;17585;17586 | chr2:178724284;178724283;178724282 | chr2:179589011;179589010;179589009 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/Y | rs1312705676 | -1.393 | 1.0 | N | 0.879 | 0.426 | 0.789026292194 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.59E-05 | None | 0 | None | 0 | 0 | 0 |
C/Y | rs1312705676 | -1.393 | 1.0 | N | 0.879 | 0.426 | 0.789026292194 | gnomAD-4.0.0 | 1.59275E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77654E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.5263 | ambiguous | 0.6131 | pathogenic | -1.703 | Destabilizing | 0.998 | D | 0.629 | neutral | None | None | None | None | N |
C/D | 0.8068 | likely_pathogenic | 0.8927 | pathogenic | 0.063 | Stabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
C/E | 0.9187 | likely_pathogenic | 0.9577 | pathogenic | 0.143 | Stabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
C/F | 0.447 | ambiguous | 0.5102 | ambiguous | -1.167 | Destabilizing | 1.0 | D | 0.881 | deleterious | N | 0.480841212 | None | None | N |
C/G | 0.3077 | likely_benign | 0.3993 | ambiguous | -1.988 | Destabilizing | 1.0 | D | 0.82 | deleterious | N | 0.458753787 | None | None | N |
C/H | 0.8557 | likely_pathogenic | 0.8935 | pathogenic | -1.942 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
C/I | 0.7375 | likely_pathogenic | 0.8057 | pathogenic | -0.981 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
C/K | 0.9649 | likely_pathogenic | 0.9806 | pathogenic | -0.642 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
C/L | 0.7278 | likely_pathogenic | 0.7758 | pathogenic | -0.981 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | None | None | None | None | N |
C/M | 0.7976 | likely_pathogenic | 0.8634 | pathogenic | -0.179 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
C/N | 0.7662 | likely_pathogenic | 0.8398 | pathogenic | -0.54 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
C/P | 0.9971 | likely_pathogenic | 0.9965 | pathogenic | -1.196 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
C/Q | 0.8702 | likely_pathogenic | 0.9173 | pathogenic | -0.488 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
C/R | 0.8201 | likely_pathogenic | 0.8634 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.883 | deleterious | N | 0.449075511 | None | None | N |
C/S | 0.3333 | likely_benign | 0.4048 | ambiguous | -1.133 | Destabilizing | 1.0 | D | 0.774 | deleterious | N | 0.396337104 | None | None | N |
C/T | 0.543 | ambiguous | 0.6315 | pathogenic | -0.866 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
C/V | 0.6337 | likely_pathogenic | 0.6922 | pathogenic | -1.196 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | N |
C/W | 0.8685 | likely_pathogenic | 0.8879 | pathogenic | -1.078 | Destabilizing | 1.0 | D | 0.843 | deleterious | N | 0.497792177 | None | None | N |
C/Y | 0.7167 | likely_pathogenic | 0.7729 | pathogenic | -1.072 | Destabilizing | 1.0 | D | 0.879 | deleterious | N | 0.493135719 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.