Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7032 | 21319;21320;21321 | chr2:178724281;178724280;178724279 | chr2:179589008;179589007;179589006 |
N2AB | 6715 | 20368;20369;20370 | chr2:178724281;178724280;178724279 | chr2:179589008;179589007;179589006 |
N2A | 5788 | 17587;17588;17589 | chr2:178724281;178724280;178724279 | chr2:179589008;179589007;179589006 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/R | rs1361147832 | -0.058 | 0.976 | N | 0.601 | 0.355 | 0.591083742983 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
T/R | rs1361147832 | -0.058 | 0.976 | N | 0.601 | 0.355 | 0.591083742983 | gnomAD-4.0.0 | 4.7913E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29781E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1026 | likely_benign | 0.0984 | benign | -0.477 | Destabilizing | 0.061 | N | 0.185 | neutral | N | 0.467719986 | None | None | N |
T/C | 0.5533 | ambiguous | 0.5532 | ambiguous | -0.126 | Destabilizing | 0.999 | D | 0.57 | neutral | None | None | None | None | N |
T/D | 0.3979 | ambiguous | 0.3743 | ambiguous | -0.071 | Destabilizing | 0.884 | D | 0.55 | neutral | None | None | None | None | N |
T/E | 0.2563 | likely_benign | 0.2473 | benign | -0.149 | Destabilizing | 0.079 | N | 0.265 | neutral | None | None | None | None | N |
T/F | 0.2747 | likely_benign | 0.2397 | benign | -0.952 | Destabilizing | 0.982 | D | 0.666 | neutral | None | None | None | None | N |
T/G | 0.3467 | ambiguous | 0.3279 | benign | -0.617 | Destabilizing | 0.884 | D | 0.597 | neutral | None | None | None | None | N |
T/H | 0.2577 | likely_benign | 0.2513 | benign | -1.019 | Destabilizing | 0.997 | D | 0.641 | neutral | None | None | None | None | N |
T/I | 0.2127 | likely_benign | 0.1975 | benign | -0.219 | Destabilizing | 0.988 | D | 0.607 | neutral | N | 0.493541151 | None | None | N |
T/K | 0.1724 | likely_benign | 0.1676 | benign | -0.381 | Destabilizing | 0.92 | D | 0.548 | neutral | N | 0.470930863 | None | None | N |
T/L | 0.137 | likely_benign | 0.1198 | benign | -0.219 | Destabilizing | 0.939 | D | 0.532 | neutral | None | None | None | None | N |
T/M | 0.0989 | likely_benign | 0.0951 | benign | 0.183 | Stabilizing | 0.997 | D | 0.591 | neutral | None | None | None | None | N |
T/N | 0.1614 | likely_benign | 0.1515 | benign | -0.094 | Destabilizing | 0.969 | D | 0.563 | neutral | None | None | None | None | N |
T/P | 0.2507 | likely_benign | 0.2022 | benign | -0.277 | Destabilizing | 0.988 | D | 0.607 | neutral | N | 0.493887867 | None | None | N |
T/Q | 0.1999 | likely_benign | 0.198 | benign | -0.407 | Destabilizing | 0.982 | D | 0.601 | neutral | None | None | None | None | N |
T/R | 0.1415 | likely_benign | 0.1298 | benign | -0.083 | Destabilizing | 0.976 | D | 0.601 | neutral | N | 0.463044885 | None | None | N |
T/S | 0.1092 | likely_benign | 0.1093 | benign | -0.301 | Destabilizing | 0.704 | D | 0.505 | neutral | N | 0.3866029 | None | None | N |
T/V | 0.1608 | likely_benign | 0.1534 | benign | -0.277 | Destabilizing | 0.939 | D | 0.497 | neutral | None | None | None | None | N |
T/W | 0.6336 | likely_pathogenic | 0.5715 | pathogenic | -0.915 | Destabilizing | 0.1 | N | 0.449 | neutral | None | None | None | None | N |
T/Y | 0.3278 | likely_benign | 0.2999 | benign | -0.647 | Destabilizing | 0.982 | D | 0.667 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.