Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7033 | 21322;21323;21324 | chr2:178724278;178724277;178724276 | chr2:179589005;179589004;179589003 |
N2AB | 6716 | 20371;20372;20373 | chr2:178724278;178724277;178724276 | chr2:179589005;179589004;179589003 |
N2A | 5789 | 17590;17591;17592 | chr2:178724278;178724277;178724276 | chr2:179589005;179589004;179589003 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | rs1176798251 | -1.778 | 0.999 | D | 0.791 | 0.598 | 0.811951969987 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/D | rs1176798251 | -1.778 | 0.999 | D | 0.791 | 0.598 | 0.811951969987 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/D | rs1176798251 | -1.778 | 0.999 | D | 0.791 | 0.598 | 0.811951969987 | gnomAD-4.0.0 | 6.57117E-06 | None | None | None | None | N | None | 2.41266E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.667 | likely_pathogenic | 0.6436 | pathogenic | -1.173 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
A/D | 0.8615 | likely_pathogenic | 0.8334 | pathogenic | -1.415 | Destabilizing | 0.999 | D | 0.791 | deleterious | D | 0.543344273 | None | None | N |
A/E | 0.7743 | likely_pathogenic | 0.7397 | pathogenic | -1.365 | Destabilizing | 0.999 | D | 0.741 | deleterious | None | None | None | None | N |
A/F | 0.6737 | likely_pathogenic | 0.6022 | pathogenic | -0.967 | Destabilizing | 0.995 | D | 0.764 | deleterious | None | None | None | None | N |
A/G | 0.3796 | ambiguous | 0.3421 | ambiguous | -1.377 | Destabilizing | 0.989 | D | 0.583 | neutral | D | 0.534449198 | None | None | N |
A/H | 0.8925 | likely_pathogenic | 0.8784 | pathogenic | -1.637 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
A/I | 0.3446 | ambiguous | 0.3227 | benign | -0.165 | Destabilizing | 0.967 | D | 0.696 | prob.neutral | None | None | None | None | N |
A/K | 0.9193 | likely_pathogenic | 0.9124 | pathogenic | -1.205 | Destabilizing | 0.998 | D | 0.746 | deleterious | None | None | None | None | N |
A/L | 0.3752 | ambiguous | 0.3418 | ambiguous | -0.165 | Destabilizing | 0.923 | D | 0.625 | neutral | None | None | None | None | N |
A/M | 0.3505 | ambiguous | 0.3234 | benign | -0.244 | Destabilizing | 0.923 | D | 0.577 | neutral | None | None | None | None | N |
A/N | 0.7584 | likely_pathogenic | 0.7422 | pathogenic | -1.095 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
A/P | 0.9648 | likely_pathogenic | 0.9421 | pathogenic | -0.407 | Destabilizing | 0.999 | D | 0.77 | deleterious | D | 0.543344273 | None | None | N |
A/Q | 0.8187 | likely_pathogenic | 0.8031 | pathogenic | -1.129 | Destabilizing | 0.998 | D | 0.753 | deleterious | None | None | None | None | N |
A/R | 0.8579 | likely_pathogenic | 0.8461 | pathogenic | -1.051 | Destabilizing | 0.998 | D | 0.766 | deleterious | None | None | None | None | N |
A/S | 0.1683 | likely_benign | 0.1639 | benign | -1.551 | Destabilizing | 0.989 | D | 0.571 | neutral | N | 0.4934356 | None | None | N |
A/T | 0.1112 | likely_benign | 0.1099 | benign | -1.382 | Destabilizing | 0.978 | D | 0.603 | neutral | D | 0.532600971 | None | None | N |
A/V | 0.1362 | likely_benign | 0.1233 | benign | -0.407 | Destabilizing | 0.37 | N | 0.401 | neutral | N | 0.509529324 | None | None | N |
A/W | 0.9527 | likely_pathogenic | 0.9354 | pathogenic | -1.43 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
A/Y | 0.8508 | likely_pathogenic | 0.8163 | pathogenic | -0.963 | Destabilizing | 0.999 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.