Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7035 | 21328;21329;21330 | chr2:178724272;178724271;178724270 | chr2:179588999;179588998;179588997 |
N2AB | 6718 | 20377;20378;20379 | chr2:178724272;178724271;178724270 | chr2:179588999;179588998;179588997 |
N2A | 5791 | 17596;17597;17598 | chr2:178724272;178724271;178724270 | chr2:179588999;179588998;179588997 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1553913782 | None | 0.001 | N | 0.256 | 0.045 | 0.194818534648 | gnomAD-4.0.0 | 8.21593E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.07986E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.6303 | likely_pathogenic | 0.5447 | ambiguous | -2.248 | Highly Destabilizing | 0.22 | N | 0.679 | prob.neutral | N | 0.479172556 | None | None | N |
V/C | 0.9611 | likely_pathogenic | 0.9437 | pathogenic | -1.98 | Destabilizing | 0.968 | D | 0.776 | deleterious | None | None | None | None | N |
V/D | 0.9912 | likely_pathogenic | 0.9844 | pathogenic | -2.845 | Highly Destabilizing | 0.667 | D | 0.857 | deleterious | N | 0.479679535 | None | None | N |
V/E | 0.973 | likely_pathogenic | 0.9564 | pathogenic | -2.676 | Highly Destabilizing | 0.726 | D | 0.842 | deleterious | None | None | None | None | N |
V/F | 0.4941 | ambiguous | 0.3802 | ambiguous | -1.473 | Destabilizing | 0.497 | N | 0.799 | deleterious | N | 0.504333282 | None | None | N |
V/G | 0.8641 | likely_pathogenic | 0.8069 | pathogenic | -2.752 | Highly Destabilizing | 0.667 | D | 0.855 | deleterious | N | 0.479679535 | None | None | N |
V/H | 0.9912 | likely_pathogenic | 0.9839 | pathogenic | -2.385 | Highly Destabilizing | 0.968 | D | 0.854 | deleterious | None | None | None | None | N |
V/I | 0.0827 | likely_benign | 0.0785 | benign | -0.859 | Destabilizing | 0.001 | N | 0.256 | neutral | N | 0.452344236 | None | None | N |
V/K | 0.979 | likely_pathogenic | 0.9663 | pathogenic | -1.904 | Destabilizing | 0.726 | D | 0.84 | deleterious | None | None | None | None | N |
V/L | 0.2456 | likely_benign | 0.1721 | benign | -0.859 | Destabilizing | None | N | 0.314 | neutral | N | 0.380291271 | None | None | N |
V/M | 0.3387 | likely_benign | 0.2444 | benign | -0.895 | Destabilizing | 0.567 | D | 0.71 | prob.delet. | None | None | None | None | N |
V/N | 0.9768 | likely_pathogenic | 0.96 | pathogenic | -2.142 | Highly Destabilizing | 0.89 | D | 0.854 | deleterious | None | None | None | None | N |
V/P | 0.9766 | likely_pathogenic | 0.9547 | pathogenic | -1.294 | Destabilizing | 0.89 | D | 0.826 | deleterious | None | None | None | None | N |
V/Q | 0.9696 | likely_pathogenic | 0.9484 | pathogenic | -2.081 | Highly Destabilizing | 0.89 | D | 0.836 | deleterious | None | None | None | None | N |
V/R | 0.9608 | likely_pathogenic | 0.9395 | pathogenic | -1.583 | Destabilizing | 0.726 | D | 0.853 | deleterious | None | None | None | None | N |
V/S | 0.9189 | likely_pathogenic | 0.8742 | pathogenic | -2.772 | Highly Destabilizing | 0.726 | D | 0.825 | deleterious | None | None | None | None | N |
V/T | 0.7212 | likely_pathogenic | 0.6326 | pathogenic | -2.465 | Highly Destabilizing | 0.272 | N | 0.71 | prob.delet. | None | None | None | None | N |
V/W | 0.981 | likely_pathogenic | 0.9618 | pathogenic | -1.922 | Destabilizing | 0.968 | D | 0.85 | deleterious | None | None | None | None | N |
V/Y | 0.961 | likely_pathogenic | 0.9297 | pathogenic | -1.592 | Destabilizing | 0.726 | D | 0.778 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.