Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7044 | 21355;21356;21357 | chr2:178724129;178724128;178724127 | chr2:179588856;179588855;179588854 |
N2AB | 6727 | 20404;20405;20406 | chr2:178724129;178724128;178724127 | chr2:179588856;179588855;179588854 |
N2A | 5800 | 17623;17624;17625 | chr2:178724129;178724128;178724127 | chr2:179588856;179588855;179588854 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs773899102 | -1.631 | 0.322 | D | 0.675 | 0.754 | 0.477685322099 | gnomAD-2.1.1 | 8.13E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.8E-05 | 0 |
P/S | rs773899102 | -1.631 | 0.322 | D | 0.675 | 0.754 | 0.477685322099 | gnomAD-4.0.0 | 6.85243E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00607E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.703 | likely_pathogenic | 0.6568 | pathogenic | -1.466 | Destabilizing | 0.885 | D | 0.717 | prob.delet. | D | 0.641854447 | None | None | N |
P/C | 0.9778 | likely_pathogenic | 0.9793 | pathogenic | -1.361 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
P/D | 0.9981 | likely_pathogenic | 0.9987 | pathogenic | -1.402 | Destabilizing | 0.986 | D | 0.794 | deleterious | None | None | None | None | N |
P/E | 0.9935 | likely_pathogenic | 0.9952 | pathogenic | -1.43 | Destabilizing | 0.986 | D | 0.804 | deleterious | None | None | None | None | N |
P/F | 0.9957 | likely_pathogenic | 0.996 | pathogenic | -1.448 | Destabilizing | 0.993 | D | 0.847 | deleterious | None | None | None | None | N |
P/G | 0.9822 | likely_pathogenic | 0.9828 | pathogenic | -1.724 | Destabilizing | 0.91 | D | 0.803 | deleterious | None | None | None | None | N |
P/H | 0.9904 | likely_pathogenic | 0.9922 | pathogenic | -1.202 | Destabilizing | 0.999 | D | 0.827 | deleterious | D | 0.658711386 | None | None | N |
P/I | 0.9233 | likely_pathogenic | 0.945 | pathogenic | -0.866 | Destabilizing | 0.386 | N | 0.759 | deleterious | None | None | None | None | N |
P/K | 0.9948 | likely_pathogenic | 0.9966 | pathogenic | -1.044 | Destabilizing | 0.986 | D | 0.799 | deleterious | None | None | None | None | N |
P/L | 0.8532 | likely_pathogenic | 0.8622 | pathogenic | -0.866 | Destabilizing | 0.885 | D | 0.806 | deleterious | D | 0.642258056 | None | None | N |
P/M | 0.9841 | likely_pathogenic | 0.9856 | pathogenic | -0.766 | Destabilizing | 0.998 | D | 0.832 | deleterious | None | None | None | None | N |
P/N | 0.9962 | likely_pathogenic | 0.9972 | pathogenic | -0.908 | Destabilizing | 0.986 | D | 0.821 | deleterious | None | None | None | None | N |
P/Q | 0.9847 | likely_pathogenic | 0.9877 | pathogenic | -1.17 | Destabilizing | 0.993 | D | 0.801 | deleterious | None | None | None | None | N |
P/R | 0.9783 | likely_pathogenic | 0.9835 | pathogenic | -0.53 | Destabilizing | 0.982 | D | 0.833 | deleterious | D | 0.658711386 | None | None | N |
P/S | 0.9519 | likely_pathogenic | 0.952 | pathogenic | -1.438 | Destabilizing | 0.322 | N | 0.675 | prob.neutral | D | 0.642056251 | None | None | N |
P/T | 0.9278 | likely_pathogenic | 0.9351 | pathogenic | -1.36 | Destabilizing | 0.885 | D | 0.783 | deleterious | D | 0.658509581 | None | None | N |
P/V | 0.8269 | likely_pathogenic | 0.8556 | pathogenic | -1.033 | Destabilizing | 0.91 | D | 0.781 | deleterious | None | None | None | None | N |
P/W | 0.999 | likely_pathogenic | 0.9992 | pathogenic | -1.53 | Destabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | N |
P/Y | 0.9974 | likely_pathogenic | 0.9976 | pathogenic | -1.21 | Destabilizing | 0.998 | D | 0.844 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.