Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7045 | 21358;21359;21360 | chr2:178724126;178724125;178724124 | chr2:179588853;179588852;179588851 |
N2AB | 6728 | 20407;20408;20409 | chr2:178724126;178724125;178724124 | chr2:179588853;179588852;179588851 |
N2A | 5801 | 17626;17627;17628 | chr2:178724126;178724125;178724124 | chr2:179588853;179588852;179588851 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs921127943 | None | 0.891 | N | 0.277 | 0.14 | 0.202086224978 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
S/T | rs921127943 | None | 0.891 | N | 0.277 | 0.14 | 0.202086224978 | gnomAD-4.0.0 | 5.13799E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.60343E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.081 | likely_benign | 0.0867 | benign | -0.593 | Destabilizing | 0.625 | D | 0.317 | neutral | N | 0.49977134 | None | None | N |
S/C | 0.1273 | likely_benign | 0.1271 | benign | -0.377 | Destabilizing | 0.997 | D | 0.355 | neutral | D | 0.526740366 | None | None | N |
S/D | 0.4988 | ambiguous | 0.4725 | ambiguous | 0.445 | Stabilizing | 0.915 | D | 0.334 | neutral | None | None | None | None | N |
S/E | 0.5226 | ambiguous | 0.4911 | ambiguous | 0.398 | Stabilizing | 0.842 | D | 0.273 | neutral | None | None | None | None | N |
S/F | 0.1149 | likely_benign | 0.1027 | benign | -1.006 | Destabilizing | 0.028 | N | 0.256 | neutral | D | 0.526325573 | None | None | N |
S/G | 0.1383 | likely_benign | 0.1418 | benign | -0.771 | Destabilizing | 0.915 | D | 0.255 | neutral | None | None | None | None | N |
S/H | 0.2905 | likely_benign | 0.2423 | benign | -1.202 | Destabilizing | 0.974 | D | 0.35 | neutral | None | None | None | None | N |
S/I | 0.128 | likely_benign | 0.1334 | benign | -0.245 | Destabilizing | 0.728 | D | 0.297 | neutral | None | None | None | None | N |
S/K | 0.573 | likely_pathogenic | 0.517 | ambiguous | -0.381 | Destabilizing | 0.067 | N | 0.162 | neutral | None | None | None | None | N |
S/L | 0.0921 | likely_benign | 0.0927 | benign | -0.245 | Destabilizing | 0.016 | N | 0.269 | neutral | None | None | None | None | N |
S/M | 0.2109 | likely_benign | 0.2094 | benign | -0.06 | Destabilizing | 0.949 | D | 0.353 | neutral | None | None | None | None | N |
S/N | 0.2018 | likely_benign | 0.1935 | benign | -0.222 | Destabilizing | 0.915 | D | 0.367 | neutral | None | None | None | None | N |
S/P | 0.7922 | likely_pathogenic | 0.8362 | pathogenic | -0.329 | Destabilizing | 0.989 | D | 0.372 | neutral | N | 0.511256231 | None | None | N |
S/Q | 0.4443 | ambiguous | 0.4124 | ambiguous | -0.395 | Destabilizing | 0.949 | D | 0.381 | neutral | None | None | None | None | N |
S/R | 0.416 | ambiguous | 0.3668 | ambiguous | -0.268 | Destabilizing | 0.904 | D | 0.365 | neutral | None | None | None | None | N |
S/T | 0.0819 | likely_benign | 0.085 | benign | -0.346 | Destabilizing | 0.891 | D | 0.277 | neutral | N | 0.507873098 | None | None | N |
S/V | 0.1299 | likely_benign | 0.1353 | benign | -0.329 | Destabilizing | 0.728 | D | 0.279 | neutral | None | None | None | None | N |
S/W | 0.2828 | likely_benign | 0.2568 | benign | -0.96 | Destabilizing | 0.998 | D | 0.401 | neutral | None | None | None | None | N |
S/Y | 0.1307 | likely_benign | 0.1236 | benign | -0.683 | Destabilizing | 0.111 | N | 0.255 | neutral | N | 0.498000595 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.