Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7049 | 21370;21371;21372 | chr2:178724114;178724113;178724112 | chr2:179588841;179588840;179588839 |
N2AB | 6732 | 20419;20420;20421 | chr2:178724114;178724113;178724112 | chr2:179588841;179588840;179588839 |
N2A | 5805 | 17638;17639;17640 | chr2:178724114;178724113;178724112 | chr2:179588841;179588840;179588839 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/S | rs2078919390 | None | 0.425 | N | 0.401 | 0.268 | 0.292787519742 | gnomAD-4.0.0 | 1.36959E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00098E-07 | 0 | 1.65854E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2878 | likely_benign | 0.2295 | benign | -0.816 | Destabilizing | 0.495 | N | 0.379 | neutral | None | None | None | None | N |
R/C | 0.219 | likely_benign | 0.1676 | benign | -0.76 | Destabilizing | 0.995 | D | 0.362 | neutral | None | None | None | None | N |
R/D | 0.5896 | likely_pathogenic | 0.5024 | ambiguous | 0.137 | Stabilizing | 0.704 | D | 0.417 | neutral | None | None | None | None | N |
R/E | 0.3021 | likely_benign | 0.2319 | benign | 0.263 | Stabilizing | 0.329 | N | 0.337 | neutral | None | None | None | None | N |
R/F | 0.4616 | ambiguous | 0.3822 | ambiguous | -0.695 | Destabilizing | 0.007 | N | 0.329 | neutral | None | None | None | None | N |
R/G | 0.1879 | likely_benign | 0.1498 | benign | -1.107 | Destabilizing | 0.425 | N | 0.429 | neutral | N | 0.489730054 | None | None | N |
R/H | 0.1164 | likely_benign | 0.0949 | benign | -1.393 | Destabilizing | 0.981 | D | 0.385 | neutral | None | None | None | None | N |
R/I | 0.2022 | likely_benign | 0.1716 | benign | -0.038 | Destabilizing | 0.642 | D | 0.444 | neutral | D | 0.529555092 | None | None | N |
R/K | 0.0799 | likely_benign | 0.075 | benign | -0.601 | Destabilizing | 0.001 | N | 0.107 | neutral | N | 0.374980397 | None | None | N |
R/L | 0.1742 | likely_benign | 0.1418 | benign | -0.038 | Destabilizing | 0.329 | N | 0.395 | neutral | None | None | None | None | N |
R/M | 0.1887 | likely_benign | 0.1617 | benign | -0.415 | Destabilizing | 0.981 | D | 0.399 | neutral | None | None | None | None | N |
R/N | 0.4432 | ambiguous | 0.3691 | ambiguous | -0.176 | Destabilizing | 0.704 | D | 0.319 | neutral | None | None | None | None | N |
R/P | 0.2498 | likely_benign | 0.197 | benign | -0.277 | Destabilizing | 0.828 | D | 0.441 | neutral | None | None | None | None | N |
R/Q | 0.1029 | likely_benign | 0.0859 | benign | -0.327 | Destabilizing | 0.704 | D | 0.334 | neutral | None | None | None | None | N |
R/S | 0.3596 | ambiguous | 0.2834 | benign | -0.987 | Destabilizing | 0.425 | N | 0.401 | neutral | N | 0.478800985 | None | None | N |
R/T | 0.1922 | likely_benign | 0.1544 | benign | -0.674 | Destabilizing | 0.642 | D | 0.413 | neutral | N | 0.48472688 | None | None | N |
R/V | 0.2816 | likely_benign | 0.228 | benign | -0.277 | Destabilizing | 0.704 | D | 0.459 | neutral | None | None | None | None | N |
R/W | 0.1749 | likely_benign | 0.1376 | benign | -0.382 | Destabilizing | 0.995 | D | 0.362 | neutral | None | None | None | None | N |
R/Y | 0.3489 | ambiguous | 0.2714 | benign | -0.089 | Destabilizing | 0.543 | D | 0.435 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.