Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7050 | 21373;21374;21375 | chr2:178724111;178724110;178724109 | chr2:179588838;179588837;179588836 |
N2AB | 6733 | 20422;20423;20424 | chr2:178724111;178724110;178724109 | chr2:179588838;179588837;179588836 |
N2A | 5806 | 17641;17642;17643 | chr2:178724111;178724110;178724109 | chr2:179588838;179588837;179588836 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | N | 0.901 | 0.483 | 0.65389565194 | gnomAD-4.0.0 | 6.84746E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00041E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9026 | likely_pathogenic | 0.8413 | pathogenic | -2.2 | Highly Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
L/C | 0.9447 | likely_pathogenic | 0.9319 | pathogenic | -1.313 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
L/D | 0.9968 | likely_pathogenic | 0.9969 | pathogenic | -1.993 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
L/E | 0.9772 | likely_pathogenic | 0.9772 | pathogenic | -1.88 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | N |
L/F | 0.654 | likely_pathogenic | 0.71 | pathogenic | -1.366 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
L/G | 0.9714 | likely_pathogenic | 0.9629 | pathogenic | -2.654 | Highly Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
L/H | 0.9665 | likely_pathogenic | 0.9716 | pathogenic | -1.991 | Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | N |
L/I | 0.2879 | likely_benign | 0.2816 | benign | -0.949 | Destabilizing | 0.999 | D | 0.544 | neutral | None | None | None | None | N |
L/K | 0.9658 | likely_pathogenic | 0.9713 | pathogenic | -1.565 | Destabilizing | 1.0 | D | 0.864 | deleterious | None | None | None | None | N |
L/M | 0.3334 | likely_benign | 0.3213 | benign | -0.717 | Destabilizing | 1.0 | D | 0.774 | deleterious | N | 0.486361351 | None | None | N |
L/N | 0.9826 | likely_pathogenic | 0.983 | pathogenic | -1.55 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
L/P | 0.6198 | likely_pathogenic | 0.5694 | pathogenic | -1.34 | Destabilizing | 1.0 | D | 0.901 | deleterious | N | 0.483067001 | None | None | N |
L/Q | 0.9089 | likely_pathogenic | 0.9147 | pathogenic | -1.588 | Destabilizing | 1.0 | D | 0.884 | deleterious | D | 0.528748379 | None | None | N |
L/R | 0.9379 | likely_pathogenic | 0.9447 | pathogenic | -1.109 | Destabilizing | 1.0 | D | 0.881 | deleterious | N | 0.505871185 | None | None | N |
L/S | 0.9795 | likely_pathogenic | 0.9693 | pathogenic | -2.239 | Highly Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
L/T | 0.9421 | likely_pathogenic | 0.9155 | pathogenic | -1.998 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
L/V | 0.3909 | ambiguous | 0.3317 | benign | -1.34 | Destabilizing | 0.999 | D | 0.529 | neutral | N | 0.488234229 | None | None | N |
L/W | 0.9134 | likely_pathogenic | 0.9308 | pathogenic | -1.624 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
L/Y | 0.9698 | likely_pathogenic | 0.9752 | pathogenic | -1.37 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.