Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7051 | 21376;21377;21378 | chr2:178724108;178724107;178724106 | chr2:179588835;179588834;179588833 |
N2AB | 6734 | 20425;20426;20427 | chr2:178724108;178724107;178724106 | chr2:179588835;179588834;179588833 |
N2A | 5807 | 17644;17645;17646 | chr2:178724108;178724107;178724106 | chr2:179588835;179588834;179588833 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.01 | N | 0.224 | 0.079 | 0.352262096564 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4071 | ambiguous | 0.3492 | ambiguous | 0.062 | Stabilizing | 0.648 | D | 0.585 | neutral | None | None | None | None | I |
K/C | 0.7706 | likely_pathogenic | 0.7005 | pathogenic | -0.295 | Destabilizing | 0.993 | D | 0.722 | prob.delet. | None | None | None | None | I |
K/D | 0.6219 | likely_pathogenic | 0.5557 | ambiguous | -0.209 | Destabilizing | 0.866 | D | 0.725 | prob.delet. | None | None | None | None | I |
K/E | 0.1761 | likely_benign | 0.135 | benign | -0.22 | Destabilizing | 0.41 | N | 0.514 | neutral | D | 0.535099772 | None | None | I |
K/F | 0.7982 | likely_pathogenic | 0.7428 | pathogenic | -0.226 | Destabilizing | 0.98 | D | 0.699 | prob.neutral | None | None | None | None | I |
K/G | 0.4408 | ambiguous | 0.3789 | ambiguous | -0.09 | Destabilizing | 0.866 | D | 0.575 | neutral | None | None | None | None | I |
K/H | 0.3539 | ambiguous | 0.3078 | benign | -0.253 | Destabilizing | 0.98 | D | 0.695 | prob.neutral | None | None | None | None | I |
K/I | 0.4298 | ambiguous | 0.3623 | ambiguous | 0.381 | Stabilizing | 0.908 | D | 0.727 | prob.delet. | N | 0.498017502 | None | None | I |
K/L | 0.4233 | ambiguous | 0.3424 | ambiguous | 0.381 | Stabilizing | 0.866 | D | 0.575 | neutral | None | None | None | None | I |
K/M | 0.3012 | likely_benign | 0.2657 | benign | 0.063 | Stabilizing | 0.993 | D | 0.701 | prob.neutral | None | None | None | None | I |
K/N | 0.4514 | ambiguous | 0.3917 | ambiguous | 0.148 | Stabilizing | 0.83 | D | 0.65 | neutral | N | 0.501207053 | None | None | I |
K/P | 0.7123 | likely_pathogenic | 0.6936 | pathogenic | 0.3 | Stabilizing | 0.929 | D | 0.729 | prob.delet. | None | None | None | None | I |
K/Q | 0.1225 | likely_benign | 0.1042 | benign | -0.02 | Destabilizing | 0.709 | D | 0.637 | neutral | N | 0.513551064 | None | None | I |
K/R | 0.0803 | likely_benign | 0.075 | benign | -0.049 | Destabilizing | 0.01 | N | 0.224 | neutral | N | 0.495426663 | None | None | I |
K/S | 0.4387 | ambiguous | 0.3785 | ambiguous | -0.237 | Destabilizing | 0.648 | D | 0.58 | neutral | None | None | None | None | I |
K/T | 0.235 | likely_benign | 0.2024 | benign | -0.124 | Destabilizing | 0.83 | D | 0.682 | prob.neutral | N | 0.518188879 | None | None | I |
K/V | 0.4147 | ambiguous | 0.3445 | ambiguous | 0.3 | Stabilizing | 0.866 | D | 0.692 | prob.neutral | None | None | None | None | I |
K/W | 0.7207 | likely_pathogenic | 0.6511 | pathogenic | -0.302 | Destabilizing | 0.993 | D | 0.725 | prob.delet. | None | None | None | None | I |
K/Y | 0.6679 | likely_pathogenic | 0.5999 | pathogenic | 0.052 | Stabilizing | 0.929 | D | 0.691 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.