Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7052 | 21379;21380;21381 | chr2:178724105;178724104;178724103 | chr2:179588832;179588831;179588830 |
N2AB | 6735 | 20428;20429;20430 | chr2:178724105;178724104;178724103 | chr2:179588832;179588831;179588830 |
N2A | 5808 | 17647;17648;17649 | chr2:178724105;178724104;178724103 | chr2:179588832;179588831;179588830 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1553913467 | None | 0.001 | N | 0.167 | 0.068 | 0.0846915920261 | gnomAD-4.0.0 | 1.59375E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86328E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1911 | likely_benign | 0.1715 | benign | -0.225 | Destabilizing | 0.002 | N | 0.205 | neutral | None | None | None | None | I |
N/C | 0.4488 | ambiguous | 0.3917 | ambiguous | 0.294 | Stabilizing | 0.497 | N | 0.279 | neutral | None | None | None | None | I |
N/D | 0.0627 | likely_benign | 0.0568 | benign | 0.03 | Stabilizing | None | N | 0.021 | neutral | N | 0.354830758 | None | None | I |
N/E | 0.183 | likely_benign | 0.1625 | benign | -0.024 | Destabilizing | None | N | 0.025 | neutral | None | None | None | None | I |
N/F | 0.608 | likely_pathogenic | 0.5593 | ambiguous | -0.704 | Destabilizing | 0.497 | N | 0.421 | neutral | None | None | None | None | I |
N/G | 0.2448 | likely_benign | 0.217 | benign | -0.36 | Destabilizing | None | N | 0.025 | neutral | None | None | None | None | I |
N/H | 0.147 | likely_benign | 0.1353 | benign | -0.423 | Destabilizing | 0.196 | N | 0.301 | neutral | N | 0.494209502 | None | None | I |
N/I | 0.2623 | likely_benign | 0.2484 | benign | 0.035 | Stabilizing | 0.065 | N | 0.421 | neutral | N | 0.460429055 | None | None | I |
N/K | 0.2352 | likely_benign | 0.218 | benign | 0.122 | Stabilizing | 0.003 | N | 0.155 | neutral | N | 0.465329389 | None | None | I |
N/L | 0.314 | likely_benign | 0.2909 | benign | 0.035 | Stabilizing | 0.018 | N | 0.239 | neutral | None | None | None | None | I |
N/M | 0.3768 | ambiguous | 0.3539 | ambiguous | 0.308 | Stabilizing | 0.497 | N | 0.293 | neutral | None | None | None | None | I |
N/P | 0.3406 | ambiguous | 0.309 | benign | -0.026 | Destabilizing | None | N | 0.101 | neutral | None | None | None | None | I |
N/Q | 0.2596 | likely_benign | 0.2389 | benign | -0.351 | Destabilizing | None | N | 0.037 | neutral | None | None | None | None | I |
N/R | 0.2998 | likely_benign | 0.2634 | benign | 0.184 | Stabilizing | 0.018 | N | 0.175 | neutral | None | None | None | None | I |
N/S | 0.1056 | likely_benign | 0.0991 | benign | -0.071 | Destabilizing | 0.001 | N | 0.167 | neutral | N | 0.423557338 | None | None | I |
N/T | 0.1506 | likely_benign | 0.1445 | benign | 0.003 | Stabilizing | 0.006 | N | 0.171 | neutral | N | 0.457979343 | None | None | I |
N/V | 0.2407 | likely_benign | 0.2232 | benign | -0.026 | Destabilizing | 0.037 | N | 0.241 | neutral | None | None | None | None | I |
N/W | 0.7965 | likely_pathogenic | 0.7614 | pathogenic | -0.747 | Destabilizing | 0.788 | D | 0.275 | neutral | None | None | None | None | I |
N/Y | 0.1687 | likely_benign | 0.1689 | benign | -0.457 | Destabilizing | 0.175 | N | 0.397 | neutral | N | 0.460682545 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.