Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7057 | 21394;21395;21396 | chr2:178724090;178724089;178724088 | chr2:179588817;179588816;179588815 |
N2AB | 6740 | 20443;20444;20445 | chr2:178724090;178724089;178724088 | chr2:179588817;179588816;179588815 |
N2A | 5813 | 17662;17663;17664 | chr2:178724090;178724089;178724088 | chr2:179588817;179588816;179588815 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.994 | N | 0.341 | 0.19 | 0.336892272479 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1148 | likely_benign | 0.1112 | benign | -0.717 | Destabilizing | 0.931 | D | 0.437 | neutral | None | None | None | None | I |
L/C | 0.4106 | ambiguous | 0.4013 | ambiguous | -0.738 | Destabilizing | 1.0 | D | 0.447 | neutral | None | None | None | None | I |
L/D | 0.4644 | ambiguous | 0.4479 | ambiguous | 0.002 | Stabilizing | 0.996 | D | 0.567 | neutral | None | None | None | None | I |
L/E | 0.2062 | likely_benign | 0.2073 | benign | -0.066 | Destabilizing | 0.97 | D | 0.502 | neutral | None | None | None | None | I |
L/F | 0.101 | likely_benign | 0.0936 | benign | -0.56 | Destabilizing | 0.994 | D | 0.341 | neutral | N | 0.461794954 | None | None | I |
L/G | 0.3091 | likely_benign | 0.2933 | benign | -0.91 | Destabilizing | 0.996 | D | 0.503 | neutral | None | None | None | None | I |
L/H | 0.1517 | likely_benign | 0.1387 | benign | -0.119 | Destabilizing | 1.0 | D | 0.563 | neutral | None | None | None | None | I |
L/I | 0.0792 | likely_benign | 0.0848 | benign | -0.322 | Destabilizing | 0.925 | D | 0.44 | neutral | N | 0.480989488 | None | None | I |
L/K | 0.1471 | likely_benign | 0.1564 | benign | -0.421 | Destabilizing | 0.155 | N | 0.23 | neutral | None | None | None | None | I |
L/M | 0.1102 | likely_benign | 0.1131 | benign | -0.423 | Destabilizing | 0.996 | D | 0.364 | neutral | None | None | None | None | I |
L/N | 0.2688 | likely_benign | 0.2611 | benign | -0.284 | Destabilizing | 0.996 | D | 0.569 | neutral | None | None | None | None | I |
L/P | 0.1528 | likely_benign | 0.1514 | benign | -0.42 | Destabilizing | 0.999 | D | 0.574 | neutral | None | None | None | None | I |
L/Q | 0.0962 | likely_benign | 0.094 | benign | -0.466 | Destabilizing | 0.991 | D | 0.526 | neutral | None | None | None | None | I |
L/R | 0.1054 | likely_benign | 0.1006 | benign | 0.106 | Stabilizing | 0.983 | D | 0.455 | neutral | None | None | None | None | I |
L/S | 0.1279 | likely_benign | 0.116 | benign | -0.807 | Destabilizing | 0.961 | D | 0.477 | neutral | N | 0.474063516 | None | None | I |
L/T | 0.1224 | likely_benign | 0.1217 | benign | -0.761 | Destabilizing | 0.97 | D | 0.454 | neutral | None | None | None | None | I |
L/V | 0.0841 | likely_benign | 0.0839 | benign | -0.42 | Destabilizing | 0.248 | N | 0.18 | neutral | N | 0.417668728 | None | None | I |
L/W | 0.1646 | likely_benign | 0.1432 | benign | -0.575 | Destabilizing | 1.0 | D | 0.648 | neutral | None | None | None | None | I |
L/Y | 0.2483 | likely_benign | 0.2327 | benign | -0.335 | Destabilizing | 0.999 | D | 0.389 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.