Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7060 | 21403;21404;21405 | chr2:178724081;178724080;178724079 | chr2:179588808;179588807;179588806 |
N2AB | 6743 | 20452;20453;20454 | chr2:178724081;178724080;178724079 | chr2:179588808;179588807;179588806 |
N2A | 5816 | 17671;17672;17673 | chr2:178724081;178724080;178724079 | chr2:179588808;179588807;179588806 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | rs751613786 | -0.979 | 0.061 | N | 0.239 | 0.261 | 0.555277862696 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 6.48E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
S/F | rs751613786 | -0.979 | 0.061 | N | 0.239 | 0.261 | 0.555277862696 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/F | rs751613786 | -0.979 | 0.061 | N | 0.239 | 0.261 | 0.555277862696 | gnomAD-4.0.0 | 6.57168E-06 | None | None | None | None | N | None | 2.41185E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0822 | likely_benign | 0.0811 | benign | -0.426 | Destabilizing | 0.977 | D | 0.412 | neutral | N | 0.454428348 | None | None | N |
S/C | 0.2029 | likely_benign | 0.2016 | benign | -0.231 | Destabilizing | 1.0 | D | 0.483 | neutral | N | 0.510591218 | None | None | N |
S/D | 0.3456 | ambiguous | 0.3212 | benign | 0.021 | Stabilizing | 0.998 | D | 0.393 | neutral | None | None | None | None | N |
S/E | 0.4835 | ambiguous | 0.4648 | ambiguous | -0.07 | Destabilizing | 0.998 | D | 0.392 | neutral | None | None | None | None | N |
S/F | 0.1985 | likely_benign | 0.1827 | benign | -0.986 | Destabilizing | 0.061 | N | 0.239 | neutral | N | 0.477256317 | None | None | N |
S/G | 0.0964 | likely_benign | 0.1011 | benign | -0.549 | Destabilizing | 0.998 | D | 0.378 | neutral | None | None | None | None | N |
S/H | 0.339 | likely_benign | 0.327 | benign | -1.048 | Destabilizing | 0.999 | D | 0.498 | neutral | None | None | None | None | N |
S/I | 0.2159 | likely_benign | 0.2064 | benign | -0.228 | Destabilizing | 0.985 | D | 0.456 | neutral | None | None | None | None | N |
S/K | 0.5496 | ambiguous | 0.5499 | ambiguous | -0.49 | Destabilizing | 0.998 | D | 0.401 | neutral | None | None | None | None | N |
S/L | 0.1264 | likely_benign | 0.1208 | benign | -0.228 | Destabilizing | 0.971 | D | 0.459 | neutral | None | None | None | None | N |
S/M | 0.2881 | likely_benign | 0.2751 | benign | 0.126 | Stabilizing | 0.999 | D | 0.499 | neutral | None | None | None | None | N |
S/N | 0.1438 | likely_benign | 0.139 | benign | -0.201 | Destabilizing | 0.998 | D | 0.416 | neutral | None | None | None | None | N |
S/P | 0.1118 | likely_benign | 0.1071 | benign | -0.265 | Destabilizing | 0.999 | D | 0.479 | neutral | N | 0.494246787 | None | None | N |
S/Q | 0.4497 | ambiguous | 0.4427 | ambiguous | -0.491 | Destabilizing | 0.999 | D | 0.477 | neutral | None | None | None | None | N |
S/R | 0.4326 | ambiguous | 0.4404 | ambiguous | -0.236 | Destabilizing | 0.999 | D | 0.474 | neutral | None | None | None | None | N |
S/T | 0.0944 | likely_benign | 0.0918 | benign | -0.317 | Destabilizing | 0.997 | D | 0.389 | neutral | N | 0.484509796 | None | None | N |
S/V | 0.2093 | likely_benign | 0.1974 | benign | -0.265 | Destabilizing | 0.985 | D | 0.461 | neutral | None | None | None | None | N |
S/W | 0.3545 | ambiguous | 0.3461 | ambiguous | -0.968 | Destabilizing | 1.0 | D | 0.566 | neutral | None | None | None | None | N |
S/Y | 0.2015 | likely_benign | 0.1899 | benign | -0.699 | Destabilizing | 0.961 | D | 0.435 | neutral | N | 0.503754363 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.