Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7066 | 21421;21422;21423 | chr2:178724063;178724062;178724061 | chr2:179588790;179588789;179588788 |
N2AB | 6749 | 20470;20471;20472 | chr2:178724063;178724062;178724061 | chr2:179588790;179588789;179588788 |
N2A | 5822 | 17689;17690;17691 | chr2:178724063;178724062;178724061 | chr2:179588790;179588789;179588788 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs553548392 | -0.625 | 0.032 | N | 0.346 | 0.105 | None | gnomAD-2.1.1 | 2.39978E-04 | None | None | None | None | N | None | 0 | 1.87298E-03 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.41044E-04 |
K/R | rs553548392 | -0.625 | 0.032 | N | 0.346 | 0.105 | None | gnomAD-3.1.2 | 1.31432E-04 | None | None | None | None | N | None | 0 | 1.31027E-03 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs553548392 | -0.625 | 0.032 | N | 0.346 | 0.105 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 1.4E-03 | None | None | 0 | 0 | None | None | None | 0 | None |
K/R | rs553548392 | -0.625 | 0.032 | N | 0.346 | 0.105 | None | gnomAD-4.0.0 | 1.28142E-04 | None | None | None | None | N | None | 0 | 1.61093E-03 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.42215E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4626 | ambiguous | 0.5661 | pathogenic | -0.681 | Destabilizing | 0.86 | D | 0.565 | neutral | None | None | None | None | N |
K/C | 0.8245 | likely_pathogenic | 0.8739 | pathogenic | -0.946 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/D | 0.7431 | likely_pathogenic | 0.8723 | pathogenic | -0.979 | Destabilizing | 0.978 | D | 0.691 | prob.neutral | None | None | None | None | N |
K/E | 0.2096 | likely_benign | 0.2951 | benign | -0.839 | Destabilizing | 0.822 | D | 0.5 | neutral | N | 0.51433771 | None | None | N |
K/F | 0.823 | likely_pathogenic | 0.892 | pathogenic | -0.297 | Destabilizing | 0.956 | D | 0.721 | prob.delet. | None | None | None | None | N |
K/G | 0.671 | likely_pathogenic | 0.7941 | pathogenic | -1.079 | Destabilizing | 0.956 | D | 0.674 | neutral | None | None | None | None | N |
K/H | 0.3643 | ambiguous | 0.453 | ambiguous | -1.468 | Destabilizing | 0.994 | D | 0.686 | prob.neutral | None | None | None | None | N |
K/I | 0.3866 | ambiguous | 0.4653 | ambiguous | 0.372 | Stabilizing | 0.89 | D | 0.677 | prob.neutral | D | 0.53069403 | None | None | N |
K/L | 0.4509 | ambiguous | 0.5462 | ambiguous | 0.372 | Stabilizing | 0.019 | N | 0.423 | neutral | None | None | None | None | N |
K/M | 0.2743 | likely_benign | 0.3431 | ambiguous | 0.257 | Stabilizing | 0.956 | D | 0.701 | prob.neutral | None | None | None | None | N |
K/N | 0.5932 | likely_pathogenic | 0.7375 | pathogenic | -1.056 | Destabilizing | 0.942 | D | 0.565 | neutral | N | 0.497431163 | None | None | N |
K/P | 0.926 | likely_pathogenic | 0.9688 | pathogenic | 0.05 | Stabilizing | 0.993 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/Q | 0.1565 | likely_benign | 0.1856 | benign | -1.088 | Destabilizing | 0.942 | D | 0.585 | neutral | D | 0.531115317 | None | None | N |
K/R | 0.0784 | likely_benign | 0.087 | benign | -0.962 | Destabilizing | 0.032 | N | 0.346 | neutral | N | 0.461428732 | None | None | N |
K/S | 0.5407 | ambiguous | 0.6579 | pathogenic | -1.598 | Destabilizing | 0.86 | D | 0.522 | neutral | None | None | None | None | N |
K/T | 0.2183 | likely_benign | 0.2774 | benign | -1.25 | Destabilizing | 0.822 | D | 0.629 | neutral | N | 0.482628137 | None | None | N |
K/V | 0.3512 | ambiguous | 0.4331 | ambiguous | 0.05 | Stabilizing | 0.754 | D | 0.655 | neutral | None | None | None | None | N |
K/W | 0.8214 | likely_pathogenic | 0.8755 | pathogenic | -0.267 | Destabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | N |
K/Y | 0.7025 | likely_pathogenic | 0.7908 | pathogenic | 0.083 | Stabilizing | 0.993 | D | 0.718 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.