Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7068 | 21427;21428;21429 | chr2:178724057;178724056;178724055 | chr2:179588784;179588783;179588782 |
N2AB | 6751 | 20476;20477;20478 | chr2:178724057;178724056;178724055 | chr2:179588784;179588783;179588782 |
N2A | 5824 | 17695;17696;17697 | chr2:178724057;178724056;178724055 | chr2:179588784;179588783;179588782 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.006 | N | 0.234 | 0.087 | 0.216624796971 | gnomAD-4.0.0 | 1.59209E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85956E-06 | 0 | 0 |
A/V | rs2078909515 | None | 0.193 | N | 0.371 | 0.165 | 0.43126412278 | gnomAD-4.0.0 | 1.59209E-06 | None | None | None | None | I | None | 0 | 2.28906E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4372 | ambiguous | 0.4321 | ambiguous | -0.796 | Destabilizing | 0.944 | D | 0.372 | neutral | None | None | None | None | I |
A/D | 0.2807 | likely_benign | 0.2658 | benign | -0.397 | Destabilizing | 0.324 | N | 0.404 | neutral | N | 0.486497748 | None | None | I |
A/E | 0.2377 | likely_benign | 0.2389 | benign | -0.507 | Destabilizing | 0.241 | N | 0.368 | neutral | None | None | None | None | I |
A/F | 0.1996 | likely_benign | 0.1833 | benign | -0.854 | Destabilizing | 0.818 | D | 0.414 | neutral | None | None | None | None | I |
A/G | 0.1464 | likely_benign | 0.1449 | benign | -0.619 | Destabilizing | 0.09 | N | 0.416 | neutral | N | 0.518706167 | None | None | I |
A/H | 0.3848 | ambiguous | 0.3698 | ambiguous | -0.685 | Destabilizing | 0.944 | D | 0.397 | neutral | None | None | None | None | I |
A/I | 0.194 | likely_benign | 0.1792 | benign | -0.267 | Destabilizing | 0.69 | D | 0.377 | neutral | None | None | None | None | I |
A/K | 0.4291 | ambiguous | 0.4306 | ambiguous | -0.818 | Destabilizing | 0.241 | N | 0.384 | neutral | None | None | None | None | I |
A/L | 0.1391 | likely_benign | 0.1371 | benign | -0.267 | Destabilizing | 0.241 | N | 0.372 | neutral | None | None | None | None | I |
A/M | 0.1811 | likely_benign | 0.1683 | benign | -0.29 | Destabilizing | 0.981 | D | 0.344 | neutral | None | None | None | None | I |
A/N | 0.2442 | likely_benign | 0.2342 | benign | -0.468 | Destabilizing | 0.527 | D | 0.42 | neutral | None | None | None | None | I |
A/P | 0.7593 | likely_pathogenic | 0.8299 | pathogenic | -0.297 | Destabilizing | 0.001 | N | 0.223 | neutral | N | 0.518879526 | None | None | I |
A/Q | 0.3092 | likely_benign | 0.3065 | benign | -0.687 | Destabilizing | 0.69 | D | 0.393 | neutral | None | None | None | None | I |
A/R | 0.3419 | ambiguous | 0.3363 | benign | -0.416 | Destabilizing | 0.69 | D | 0.387 | neutral | None | None | None | None | I |
A/S | 0.0744 | likely_benign | 0.0719 | benign | -0.784 | Destabilizing | 0.001 | N | 0.09 | neutral | N | 0.392912797 | None | None | I |
A/T | 0.0764 | likely_benign | 0.0717 | benign | -0.798 | Destabilizing | 0.006 | N | 0.234 | neutral | N | 0.443090901 | None | None | I |
A/V | 0.1108 | likely_benign | 0.1041 | benign | -0.297 | Destabilizing | 0.193 | N | 0.371 | neutral | N | 0.493578436 | None | None | I |
A/W | 0.5299 | ambiguous | 0.5034 | ambiguous | -1.059 | Destabilizing | 0.981 | D | 0.573 | neutral | None | None | None | None | I |
A/Y | 0.3337 | likely_benign | 0.3097 | benign | -0.685 | Destabilizing | 0.818 | D | 0.416 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.