Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 7072 | 21439;21440;21441 | chr2:178724045;178724044;178724043 | chr2:179588772;179588771;179588770 |
N2AB | 6755 | 20488;20489;20490 | chr2:178724045;178724044;178724043 | chr2:179588772;179588771;179588770 |
N2A | 5828 | 17707;17708;17709 | chr2:178724045;178724044;178724043 | chr2:179588772;179588771;179588770 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/H | rs1370301283 | 0.234 | 1.0 | D | 0.649 | 0.496 | 0.747146340571 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 9.97E-05 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2923 | likely_benign | 0.3008 | benign | -0.293 | Destabilizing | 1.0 | D | 0.647 | neutral | N | 0.496212941 | None | None | I |
P/C | 0.8561 | likely_pathogenic | 0.8746 | pathogenic | -0.699 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | I |
P/D | 0.6756 | likely_pathogenic | 0.6936 | pathogenic | 0.044 | Stabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | I |
P/E | 0.5724 | likely_pathogenic | 0.6094 | pathogenic | -0.068 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
P/F | 0.8513 | likely_pathogenic | 0.8569 | pathogenic | -0.579 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | I |
P/G | 0.5899 | likely_pathogenic | 0.6203 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
P/H | 0.5167 | ambiguous | 0.55 | ambiguous | -0.019 | Destabilizing | 1.0 | D | 0.649 | neutral | D | 0.534195878 | None | None | I |
P/I | 0.7374 | likely_pathogenic | 0.743 | pathogenic | -0.2 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | I |
P/K | 0.6499 | likely_pathogenic | 0.6942 | pathogenic | -0.261 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
P/L | 0.4222 | ambiguous | 0.4184 | ambiguous | -0.2 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.501341503 | None | None | I |
P/M | 0.715 | likely_pathogenic | 0.7226 | pathogenic | -0.377 | Destabilizing | 1.0 | D | 0.654 | neutral | None | None | None | None | I |
P/N | 0.5981 | likely_pathogenic | 0.6189 | pathogenic | -0.066 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | I |
P/Q | 0.4431 | ambiguous | 0.4748 | ambiguous | -0.258 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
P/R | 0.4538 | ambiguous | 0.4971 | ambiguous | 0.147 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | N | 0.494758137 | None | None | I |
P/S | 0.3631 | ambiguous | 0.3824 | ambiguous | -0.438 | Destabilizing | 1.0 | D | 0.678 | prob.neutral | N | 0.487414303 | None | None | I |
P/T | 0.3199 | likely_benign | 0.3351 | benign | -0.448 | Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.488704523 | None | None | I |
P/V | 0.5731 | likely_pathogenic | 0.5801 | pathogenic | -0.199 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
P/W | 0.9242 | likely_pathogenic | 0.931 | pathogenic | -0.658 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | None | None | None | None | I |
P/Y | 0.8047 | likely_pathogenic | 0.821 | pathogenic | -0.356 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.